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NC_071137.1__YP_010684258.1__PQZ64_gp42__00042

Bact-Vir

Identity

Accession:: NC_071137 ↗
Kingdom:: phage

Quality

84.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bimevirus› Klebsiella_phage_vB_KpnM_IME346

TaxID: 2562174

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-58

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1m1fB00	2.30.30.110	Mainly Beta › Roll › SH3 type barrels. ›	0.63	53.0	4.14e-01	100.0%	75.2%
4fdyA02	3.90.1720.10	Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme)	0.60	47.0	3.59e-01	100.0%	40.3%
4hi8B00	2.10.110.10	Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein	0.58	42.0	3.59e-01	77.8%	55.6%
3isrA01	3.10.620.30	Alpha Beta › Roll › C8orf32 fold ›	0.57	46.0	3.18e-01	100.0%	24.3%
2heqA01	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.56	46.0	4.42e-01	100.0%	96.3%
2crhA01	3.30.505.10	Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain	0.54	39.0	3.17e-01	84.4%	39.2%
1ekgA00	3.30.920.10	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY	0.54	42.0	3.17e-01	88.9%	93.3%
2f4lA02	2.40.10.120	Mainly Beta › Beta Barrel › Thrombin, subunit H ›	0.53	39.0	4.00e-01	84.4%	93.0%
4bi3A01	3.90.1720.80	Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) ›	0.53	43.0	3.59e-01	100.0%	48.4%
6igbA00	2.130.10.10	Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase	0.53	43.0	2.62e-01	100.0%	98.6%
8a7dC01	2.60.120.200	Mainly Beta › Sandwich › Jelly Rolls ›	0.53	39.0	2.56e-01	82.2%	76.9%
2pvpA01	3.40.50.20	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.51	40.0	3.08e-01	93.3%	44.5%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3933119	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.72	61.0	4.47e-01	100.0%	66.2%
3882494	220.1.1.1 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH	0.69	58.0	4.42e-01	100.0%	65.2%
5012995	219.1.1.76 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553	0.63	51.0	3.43e-01	100.0%	32.2%
4027068	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.63	54.0	4.15e-01	100.0%	64.2%
3941320	4.1.1.303 ↗	beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus	0.63	52.0	4.51e-01	100.0%	64.0%
3947087	219.1.1.13 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core	0.62	51.0	3.61e-01	100.0%	30.0%
3591144	4.8.1.0 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like	0.60	48.0	3.50e-01	100.0%	38.0%
3976351	219.1.1.40 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like	0.57	43.0	2.92e-01	100.0%	25.6%
3279689	222.1.1.0 ↗	a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase	0.54	44.0	2.86e-01	93.3%	63.3%
3227081	11.1.1.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like	0.53	41.0	3.58e-01	93.3%	75.0%
3733533	2003.1.3.1 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO	0.52	35.0	2.12e-01	71.1%	9.7%
3392646	2002.1.1.106 ↗	a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD	0.50	37.0	2.25e-01	100.0%	10.7%