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NC_071142.1__YP_010684994.1__PRB79_gp53__00071

Bact-Vir

NC_071142.1__YP_010684994.1__PRB79_gp53__00071

Identity

Accession:
NC_071142 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-93
PDB
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6lpfA01 1.10.730.20 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › 0.59 33.0 2.72e-01 74.2% 31.9%
3x29A00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.58 38.0 3.15e-01 92.5% 38.0%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 29.0 3.33e-01 76.3% 66.2%
5awwY00 1.10.3370.10 Mainly Alpha › Orthogonal Bundle › Preprotein translocase SecY subunit › SecY subunit domain 0.53 40.0 2.57e-01 79.6% 88.0%
2dlcX02 1.10.240.10 Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase 0.52 36.0 3.32e-01 73.1% 91.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 32.0 3.42e-01 81.7% 72.3%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3456246 330.1.1.19 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_2 0.61 35.0 3.59e-01 77.4% 58.9%
3607985 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.57e-01 83.9% 81.0%
3709607 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.57 39.0 3.16e-01 71.0% 46.3%
4970770 102.2.1.0 alpha arrays › HhH/H2TH › H2TH › H2TH 0.54 34.0 3.03e-01 71.0% 43.0%
3957429 1.1.5.15 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › F420H2_quin_red 0.52 36.0 3.38e-01 71.0% 63.9%