←Back to structures
NC_071145.1__YP_010685214.1__PRB82_gp34__00034
Bact-VirNC_071145.1__YP_010685214.1__PRB82_gp34__00034
Identity
- Accession:
- NC_071145 ↗
- Kingdom:
- phage
Quality
91.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-82
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.86 | 60.0 | 5.27e-01 | 71.8% | 67.0% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.72 | 55.0 | 5.11e-01 | 79.5% | 74.5% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.68 | 51.0 | 3.38e-01 | 83.3% | 27.4% |
| 7x0fA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.66 | 28.0 | 2.23e-01 | 74.4% | 20.3% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.65 | 49.0 | 4.05e-01 | 79.5% | 51.1% |
| 2fcwA00 | 1.20.81.10 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › RAP domain | 0.61 | 53.0 | 4.75e-01 | 93.6% | 69.8% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 3.45e-01 | 75.6% | 82.9% |
| 6oyfA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.57 | 39.0 | 3.12e-01 | 70.5% | 100.0% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.57 | 39.0 | 3.63e-01 | 100.0% | 57.9% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 48.0 | 3.02e-01 | 100.0% | 55.4% |
| 1mukA02 | 3.90.1850.10 | Alpha Beta › Alpha-Beta Complex › RNA-directed RNA polymerase lambda-3 › RNA-directed RNA polymerase lambda-3 | 0.53 | 42.0 | 2.60e-01 | 88.5% | 54.7% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 35.0 | 3.23e-01 | 70.5% | 58.7% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 60305 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.86 | 60.0 | 5.33e-01 | 71.8% | 68.9% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.85 | 59.0 | 5.07e-01 | 71.8% | 63.5% |
| 3593339 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.84 | 59.0 | 5.06e-01 | 71.8% | 63.5% |
| 3690513 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.82 | 57.0 | 4.69e-01 | 71.8% | 54.9% |
| 4928315 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.81 | 55.0 | 5.66e-01 | 70.5% | 93.3% |
| 3614763 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.80 | 56.0 | 4.74e-01 | 71.8% | 65.0% |
| 3935332 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.80 | 55.0 | 4.61e-01 | 71.8% | 56.2% |
| 4324539 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.80 | 71.0 | 4.95e-01 | 97.4% | 35.8% |
| 4271212 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.77 | 54.0 | 4.56e-01 | 71.8% | 68.3% |
| 3406351 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.76 | 60.0 | 5.23e-01 | 82.1% | 87.3% |
| 3482328 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.74 | 49.0 | 4.40e-01 | 80.8% | 50.5% |
| 3275606 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.73 | 44.0 | 3.74e-01 | 92.3% | 39.2% |
| 4017372 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.72 | 56.0 | 4.83e-01 | 80.8% | 74.8% |
| 1000517 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.72 | 57.0 | 5.19e-01 | 83.3% | 82.2% |
| 139279 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.72 | 55.0 | 5.11e-01 | 79.5% | 74.5% |
| 4410759 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.72 | 55.0 | 4.71e-01 | 79.5% | 61.7% |
| 4666900 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 54.0 | 4.57e-01 | 79.5% | 67.2% |
| 3712081 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 53.0 | 4.70e-01 | 78.2% | 75.5% |
| 4224821 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 54.0 | 4.67e-01 | 79.5% | 73.0% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 56.0 | 4.84e-01 | 83.3% | 82.6% |
| 4025452 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.71 | 55.0 | 4.79e-01 | 82.1% | 83.5% |
| 3675304 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 49.0 | 4.25e-01 | 71.8% | 65.8% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.71 | 56.0 | 4.83e-01 | 83.3% | 83.5% |
| 3506058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 53.0 | 4.84e-01 | 79.5% | 79.0% |
| 4681355 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.70 | 52.0 | 4.52e-01 | 79.5% | 70.0% |
| 3254236 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.70 | 48.0 | 4.33e-01 | 79.5% | 53.3% |
| 3586018 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.70 | 53.0 | 4.26e-01 | 79.5% | 50.0% |
| 3228583 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.70 | 52.0 | 4.51e-01 | 78.2% | 84.3% |
| 3241792 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.69 | 57.0 | 4.12e-01 | 100.0% | 33.2% |
| 3946654 | 517.2.1.0 ↗ | beta barrels › CBF-like › TraF › TraF | 0.69 | 51.0 | 3.45e-01 | 76.9% | 22.2% |
| 3216059 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.69 | 57.0 | 3.71e-01 | 100.0% | 21.9% |
| 3922539 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.68 | 57.0 | 3.79e-01 | 89.7% | 50.3% |
| 4593130 | 601.7.1.40 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › Cas13a_C | 0.68 | 53.0 | 3.47e-01 | 82.1% | 42.7% |
| 3485296 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.68 | 51.0 | 4.62e-01 | 79.5% | 80.0% |
| 3265214 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.68 | 54.0 | 4.68e-01 | 84.6% | 83.5% |
| 3878697 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.68 | 57.0 | 3.73e-01 | 91.0% | 47.1% |
| 4181293 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 50.0 | 4.47e-01 | 79.5% | 69.1% |
| 3828336 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 51.0 | 4.42e-01 | 79.5% | 61.4% |
| 3937187 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 50.0 | 4.47e-01 | 79.5% | 63.6% |
| 3859550 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 50.0 | 4.33e-01 | 79.5% | 58.3% |
| 4112182 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.67 | 51.0 | 4.46e-01 | 82.1% | 87.3% |
| 3227786 | 109.4.1.548 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120 | 0.66 | 60.0 | 3.42e-01 | 100.0% | 69.1% |
| 3234976 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.66 | 49.0 | 4.40e-01 | 79.5% | 76.4% |
| 3579472 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.66 | 50.0 | 4.24e-01 | 82.1% | 71.5% |
| 4259368 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.66 | 50.0 | 4.34e-01 | 82.1% | 85.8% |
| 3582184 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 54.0 | 3.80e-01 | 88.5% | 40.6% |
| 5035493 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 48.0 | 4.32e-01 | 78.2% | 74.3% |
| 3787269 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.64 | 48.0 | 4.19e-01 | 78.2% | 68.2% |
| 3603208 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 48.0 | 5.11e-01 | 79.5% | 91.4% |
| 4977598 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.63 | 48.0 | 4.20e-01 | 78.2% | 70.9% |
| 4022379 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 43.0 | 3.52e-01 | 71.8% | 37.3% |
| 3601807 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 54.0 | 3.19e-01 | 97.4% | 70.5% |
| 5062471 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 46.0 | 4.12e-01 | 78.2% | 70.9% |
| 3270487 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.62 | 46.0 | 4.14e-01 | 79.5% | 70.9% |
| 3580090 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.61 | 45.0 | 3.72e-01 | 78.2% | 45.4% |
| 3231161 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.61 | 54.0 | 3.09e-01 | 100.0% | 48.8% |
| 3213680 | 5001.1.1.66 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg | 0.60 | 51.0 | 3.42e-01 | 100.0% | 24.7% |
| 3399488 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.60 | 48.0 | 2.70e-01 | 89.7% | 48.9% |
| 3601486 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 2.83e-01 | 92.3% | 11.2% |
| 4003744 | 5067.1.1.3 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Patched | 0.57 | 50.0 | 2.89e-01 | 100.0% | 84.8% |
| 3637271 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.57 | 48.0 | 2.69e-01 | 93.6% | 67.2% |
| 3589150 | 2498.1.1.7 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M3,Peptidase_M3_N | 0.56 | 49.0 | 2.95e-01 | 100.0% | 18.0% |
| 3346100 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.56 | 45.0 | 2.49e-01 | 89.7% | 55.2% |
| 3600149 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.56 | 41.0 | 3.79e-01 | 94.9% | 61.0% |
| 3575884 | 109.4.1.1544 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1 | 0.54 | 43.0 | 2.39e-01 | 89.7% | 54.0% |
| 3913346 | 109.4.1.1776 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_EZ, TPR_CAND1 | 0.53 | 45.0 | 2.52e-01 | 98.7% | 83.0% |
| 3840795 | 109.4.1.3368 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_EZ, HEAT_GCN1 | 0.52 | 45.0 | 2.62e-01 | 98.7% | 72.7% |
| 4026547 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 45.0 | 3.02e-01 | 100.0% | 35.6% |
| 3733217 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.51 | 41.0 | 3.37e-01 | 91.0% | 47.3% |
| 3751168 | 109.4.1.122 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 45.0 | 2.61e-01 | 100.0% | 71.5% |
| 3184080 | 109.4.1.1940 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, TPR_CAND1, PF28359 | 0.50 | 42.0 | 2.33e-01 | 93.6% | 55.9% |
| 3920157 | 109.4.1.2709 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_GCN1 | 0.50 | 43.0 | 2.54e-01 | 97.4% | 71.1% |
D2
medium
residues 86-170
Domain cluster:
rep: MZ501270.1__QZA71221.1__AH07_35__00035__D194-274
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3axjB01 | 1.20.58.190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 | 0.80 | 54.0 | 4.34e-01 | 70.6% | 38.1% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.71 | 49.0 | 4.49e-01 | 70.6% | 59.1% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 43.0 | 5.04e-01 | 70.6% | 89.7% |
| 3m7gA02 | 1.10.8.1010 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 58.0 | 5.63e-01 | 89.4% | 93.7% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.70 | 53.0 | 4.44e-01 | 80.0% | 70.3% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 56.0 | 5.50e-01 | 89.4% | 88.0% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.66 | 54.0 | 5.55e-01 | 89.4% | 100.0% |
| 1u00A02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.66 | 53.0 | 5.15e-01 | 87.1% | 77.1% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 59.0 | 4.12e-01 | 100.0% | 83.6% |
| 1c17M00 | 1.20.120.220 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A | 0.66 | 46.0 | 3.92e-01 | 74.1% | 44.4% |
| 2ficB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.65 | 58.0 | 4.37e-01 | 97.6% | 90.0% |
| 1rj1A00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.64 | 55.0 | 4.61e-01 | 95.3% | 62.8% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 56.0 | 4.71e-01 | 98.8% | 96.7% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.64 | 44.0 | 3.87e-01 | 70.6% | 58.4% |
| 1dkxA02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 50.0 | 5.19e-01 | 89.4% | 91.3% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.60 | 50.0 | 4.51e-01 | 95.3% | 65.8% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 41.0 | 4.17e-01 | 70.6% | 75.6% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.59 | 50.0 | 4.09e-01 | 100.0% | 64.2% |
| 3kyiA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.58 | 48.0 | 4.22e-01 | 91.8% | 100.0% |
| 1xzpA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.57 | 47.0 | 3.87e-01 | 92.9% | 60.2% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 50.0 | 4.03e-01 | 98.8% | 67.7% |
| 1jb0F00 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.54 | 42.0 | 3.60e-01 | 90.6% | 51.8% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 39.0 | 3.73e-01 | 76.5% | 86.5% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.52 | 45.0 | 4.22e-01 | 92.9% | 94.3% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4951992 | 5041.1.1.55 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › DUF1622 | 0.87 | 56.0 | 5.25e-01 | 70.6% | 56.0% |
| 3981640 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.79 | 54.0 | 5.32e-01 | 70.6% | 67.8% |
| 3630501 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.78 | 55.0 | 3.55e-01 | 72.9% | 18.6% |
| 4843090 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.76 | 53.0 | 4.81e-01 | 74.1% | 54.5% |
| 4575830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 51.0 | 3.19e-01 | 70.6% | 13.8% |
| 3798426 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.72 | 49.0 | 5.34e-01 | 70.6% | 100.0% |
| 5076982 | 611.2.1.0 ↗ | alpha bundles › N-cbl like › N-terminal domain of cbl (N-cbl) › N-terminal domain of cbl (N-cbl) | 0.71 | 59.0 | 5.50e-01 | 89.4% | 93.3% |
| 3635408 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.71 | 50.0 | 4.27e-01 | 74.1% | 50.7% |
| 5078048 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.70 | 48.0 | 5.05e-01 | 70.6% | 89.3% |
| 3488158 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.69 | 57.0 | 4.99e-01 | 89.4% | 77.6% |
| 3489761 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.67 | 60.0 | 4.39e-01 | 100.0% | 94.7% |
| 3617282 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 58.0 | 4.97e-01 | 98.8% | 68.6% |
| 3996622 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 59.0 | 4.96e-01 | 100.0% | 65.5% |
| 3936733 | 174.1.1.50 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF7807 | 0.65 | 58.0 | 4.64e-01 | 100.0% | 65.9% |
| 4393454 | 632.15.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) › DUF2678 | 0.65 | 52.0 | 4.93e-01 | 85.9% | 85.0% |
| 3903366 | 310.2.1.39 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › PF25974 | 0.64 | 45.0 | 4.26e-01 | 74.1% | 63.8% |
| 5052538 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.64 | 46.0 | 4.78e-01 | 77.6% | 88.7% |
| 3364202 | 3395.1.1.1 ↗ | extended segments › Transmembrane protein 14A › Transmembrane protein 14A › Transmembrane protein 14A › Tmemb_14 | 0.63 | 55.0 | 5.03e-01 | 97.6% | 83.5% |
| 5078792 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.63 | 50.0 | 4.69e-01 | 96.5% | 70.0% |
| 4328868 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.63 | 54.0 | 3.82e-01 | 96.5% | 85.7% |
| 5027497 | 632.6.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit | 0.62 | 47.0 | 4.86e-01 | 82.4% | 92.5% |
| 3483032 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 46.0 | 4.13e-01 | 80.0% | 80.0% |
| 4022294 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.61 | 49.0 | 4.63e-01 | 89.4% | 94.3% |
| 3964502 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.60 | 49.0 | 4.55e-01 | 90.6% | 74.5% |
| None | — | 0.60 | 45.0 | 3.21e-01 | 81.2% | 31.1% | |
| 5033072 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.59 | 51.0 | 4.63e-01 | 100.0% | 75.6% |
| None | — | 0.58 | 44.0 | 3.15e-01 | 81.2% | 33.5% | |
| 4222581 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.57 | 43.0 | 4.02e-01 | 81.2% | 79.1% |
| 4514462 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.56 | 44.0 | 4.28e-01 | 89.4% | 94.0% |
| 3492519 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.56 | 45.0 | 4.20e-01 | 90.6% | 95.5% |
| 4564044 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.55 | 41.0 | 2.95e-01 | 80.0% | 31.9% |