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NC_071149.1__YP_010685516.1__PRB86_gp22__00022
Bact-VirNC_071149.1__YP_010685516.1__PRB86_gp22__00022
Identity
- Accession:
- NC_071149 ↗
- Kingdom:
- phage
Quality
94.1
mean pLDDT
Taxonomy
TaxID: 2981580
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-38
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.69 | 61.0 | 5.49e-01 | 100.0% | 73.5% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.61 | 50.0 | 4.35e-01 | 100.0% | 58.1% |
| 8c5yA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 39.0 | 2.69e-01 | 100.0% | 18.8% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.51 | 43.0 | 3.97e-01 | 94.6% | 85.4% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000630 | 375.1.1.33 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Spt4 | 0.88 | 77.0 | 6.12e-01 | 100.0% | 50.7% |
| 4008953 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 61.0 | 6.25e-01 | 100.0% | 88.6% |
| 3654792 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 52.0 | 5.53e-01 | 100.0% | 100.0% |
| 5051531 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.71 | 56.0 | 5.51e-01 | 100.0% | 82.5% |
| 3187460 | 375.1.1.179 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha | 0.70 | 57.0 | 3.73e-01 | 100.0% | 20.5% |
| 4036787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 55.0 | 5.28e-01 | 100.0% | 82.2% |
| 4962856 | 375.1.1.349 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26408 | 0.68 | 53.0 | 5.24e-01 | 94.6% | 95.0% |
| 4992515 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.66 | 52.0 | 4.93e-01 | 100.0% | 78.0% |
| 4310743 | 375.1.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › tRNA-synt_1 | 0.66 | 53.0 | 5.12e-01 | 100.0% | 88.9% |
| 3710673 | 2005.1.1.1 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 | 0.65 | 53.0 | 3.31e-01 | 100.0% | 15.2% |
| 4218543 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 51.0 | 5.11e-01 | 100.0% | 92.5% |
| 3496353 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.65 | 50.0 | 3.19e-01 | 100.0% | 16.1% |
| 3578353 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.63 | 50.0 | 2.99e-01 | 100.0% | 10.4% |
| 4218541 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 46.0 | 4.58e-01 | 100.0% | 80.0% |
| 3936036 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.62 | 49.0 | 3.66e-01 | 100.0% | 33.0% |
| 4980041 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 48.0 | 4.55e-01 | 94.6% | 86.7% |
| 3177203 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.57 | 46.0 | 4.46e-01 | 100.0% | 88.9% |
| 3726067 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 42.0 | 4.23e-01 | 100.0% | 87.5% |
| 3628251 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.56 | 44.0 | 4.39e-01 | 100.0% | 85.0% |
| 3265494 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 40.0 | 4.02e-01 | 100.0% | 100.0% |
| 3493651 | 2005.1.1.29 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1g | 0.54 | 37.0 | 2.38e-01 | 70.3% | 36.7% |
| 3999078 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.52 | 37.0 | 3.77e-01 | 100.0% | 100.0% |
| 4624487 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.52 | 38.0 | 3.88e-01 | 94.6% | 100.0% |
| 3936917 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.50 | 36.0 | 3.64e-01 | 94.6% | 100.0% |