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NC_072501.1__YP_010719769.1__P6F33_gp84__00084

Bact-Vir

NC_072501.1__YP_010719769.1__P6F33_gp84__00084

Identity

Accession:
NC_072501 ↗
Kingdom:
phage

Quality

88.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-71
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21779.3 best DUF6874 31.4 2.20e-07 96.5% 51.2%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4cfsA02 1.10.210.20 Mainly Alpha › Orthogonal Bundle › Uteroglobin › 0.59 38.0 3.60e-01 70.2% 54.3%
2ii2A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.57 40.0 3.36e-01 73.7% 87.8%
4bkxA01 4.10.1240.50 Few Secondary Structures › Irregular › Hormone receptor fold › 0.54 46.0 3.76e-01 98.2% 60.2%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.53 41.0 4.16e-01 89.5% 89.1%
3osgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.53 35.0 3.48e-01 78.9% 65.0%
5dicA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 45.0 3.62e-01 96.5% 87.8%
1x9xA00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.53 33.0 3.30e-01 70.2% 58.1%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4258320 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.56 43.0 3.91e-01 86.0% 65.0%