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NC_073050.1__YP_010740102.1__P9294_gp085__00085
Bact-VirNC_073050.1__YP_010740102.1__P9294_gp085__00085
Identity
- Accession:
- NC_073050 ↗
- Kingdom:
- phage
Quality
48.9
mean pLDDT
Taxonomy
TaxID: 2917160
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 49-125
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4heoA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.62 | 36.0 | 4.19e-01 | 74.0% | 81.8% |
| 2r0rB00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.61 | 44.0 | 4.48e-01 | 87.0% | 76.9% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 47.0 | 3.81e-01 | 89.6% | 58.5% |
| 8st7C01 | 1.10.4140.10 | Mainly Alpha › Orthogonal Bundle › effector protein (NleL) fold › effector protein (NleL) | 0.57 | 46.0 | 3.52e-01 | 92.2% | 65.0% |
| 2x1lB02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.52 | 35.0 | 3.55e-01 | 70.1% | 76.3% |
| 3efoB01 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.52 | 39.0 | 3.22e-01 | 83.1% | 62.9% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 34.0 | 3.13e-01 | 70.1% | 52.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3682682 | 3252.2.1.0 ↗ | alpha arrays › SHQ1 C-terminal domain-like › Anaphase-promoting complex subunit 5 N-terminal domain › Anaphase-promoting complex subunit 5 N-terminal domain | 0.77 | 57.0 | 4.15e-01 | 76.6% | 48.4% |
| 4457163 | 109.3.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 | 0.65 | 45.0 | 3.61e-01 | 71.4% | 80.0% |
| 5078343 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.60 | 37.0 | 3.98e-01 | 74.0% | 73.4% |
| 5017330 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 41.0 | 3.51e-01 | 77.9% | 49.6% |
| 5040647 | 604.39.1.5 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt | 0.54 | 43.0 | 3.43e-01 | 90.9% | 58.8% |
| 3789341 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.50 | 38.0 | 2.51e-01 | 80.5% | 70.9% |
D2
medium
residues 126-255