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NC_073050.1__YP_010740153.1__P9294_gp136__00136

Bact-Vir

NC_073050.1__YP_010740153.1__P9294_gp136__00136

Identity

Accession:
NC_073050 ↗
Kingdom:
phage

Quality

80.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zhangjivirus› Bacillus_phage_FADO

TaxID: 2917160

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-75
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4wqkA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.59 45.0 3.19e-01 82.5% 43.4%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.56 46.0 3.25e-01 94.7% 67.5%
3purA03 1.20.58.1360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 44.0 3.78e-01 100.0% 67.3%
5dkoA02 1.10.3900.10 Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like 0.52 41.0 3.08e-01 93.0% 53.3%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3509749 604.1.1.175 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_Dys-1 0.73 48.0 4.11e-01 80.7% 43.3%
4465072 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.66 50.0 3.95e-01 80.7% 44.3%
4928305 7566.1.1.2 ↗ a/b three-layered sandwiches › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › HflX family GTPase N-terminal domain › GTP-bdg_N 0.57 42.0 2.96e-01 78.9% 31.4%
D2 medium residues 76-138
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 62.0 5.45e-01 73.0% 55.2%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 61.0 5.91e-01 73.0% 65.7%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.87 61.0 4.13e-01 73.0% 22.8%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 64.0 6.44e-01 77.8% 78.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 61.0 5.72e-01 73.0% 61.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 60.0 6.27e-01 73.0% 79.3%
1ku3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 62.0 6.29e-01 77.8% 90.2%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 63.0 5.29e-01 82.5% 50.5%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 55.0 5.91e-01 71.4% 87.0%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 6.16e-01 87.3% 83.1%
4u7iA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.77 55.0 4.78e-01 100.0% 50.5%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 4.70e-01 71.4% 50.6%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 53.0 4.87e-01 71.4% 60.0%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.25e-01 71.4% 73.4%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.70 55.0 4.15e-01 85.7% 51.3%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.47e-01 76.2% 69.3%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.69 47.0 4.97e-01 71.4% 89.3%
7y9hB01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.67 53.0 3.38e-01 85.7% 35.2%
6vydA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.66 52.0 3.34e-01 85.7% 39.3%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.63 45.0 3.12e-01 77.8% 30.8%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 44.0 4.13e-01 76.2% 100.0%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.10e-01 95.2% 90.1%
3mc1A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 39.0 3.89e-01 76.2% 86.6%
3vokA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 40.0 3.12e-01 93.7% 36.4%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.92 68.0 6.31e-01 76.2% 64.0%
4030763 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 64.0 6.41e-01 73.0% 72.3%
3981529 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.91 62.0 6.65e-01 71.4% 81.8%
1546121 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 75.0 7.07e-01 92.1% 74.7%
3942695 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 63.0 6.27e-01 73.0% 70.8%
4960928 101.1.3.16 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 0.90 80.0 8.17e-01 95.2% 100.0%
4010691 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 63.0 6.72e-01 73.0% 83.6%
3976103 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 63.0 6.25e-01 73.0% 70.8%
4578719 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 63.0 6.31e-01 73.0% 73.0%
3945377 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 62.0 6.20e-01 73.0% 70.8%
4007717 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 62.0 5.69e-01 73.0% 58.7%
4492035 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 62.0 6.02e-01 73.0% 65.7%
3279743 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 66.0 6.34e-01 77.8% 70.0%
2753461 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 62.0 5.79e-01 73.0% 60.5%
3290024 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 62.0 5.67e-01 73.0% 57.5%
4606780 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 62.0 6.39e-01 73.0% 76.7%
3288310 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 62.0 5.96e-01 73.0% 65.7%
4404485 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 62.0 6.36e-01 73.0% 76.7%
2440126 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.88 61.0 5.56e-01 73.0% 56.1%
3979166 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 61.0 5.89e-01 73.0% 65.7%
4661582 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 61.0 4.96e-01 73.0% 41.8%
4131887 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 61.0 5.61e-01 73.0% 58.2%
3942478 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 61.0 6.53e-01 73.0% 83.6%
1177545 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 61.0 5.94e-01 73.0% 67.6%
4008147 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 61.0 6.08e-01 73.0% 70.8%
3962552 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 61.0 5.72e-01 73.0% 61.3%
3283527 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.87 64.0 5.87e-01 77.8% 61.3%
3981688 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.86 60.0 6.02e-01 73.0% 70.8%
3974013 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 60.0 6.20e-01 73.0% 76.7%
3968864 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 60.0 5.66e-01 73.0% 61.3%
4031535 101.1.1.275 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.86 63.0 6.49e-01 77.8% 83.3%
2849702 101.1.2.674 ↗ alpha arrays › HTH › HTH › winged helix domain › PF29648 0.86 59.0 5.15e-01 71.4% 53.3%
3941764 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 60.0 5.96e-01 73.0% 70.8%
3944309 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 60.0 6.65e-01 73.0% 92.0%
4214308 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 66.0 5.92e-01 82.5% 63.5%
3969657 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 60.0 5.60e-01 73.0% 61.3%
4004247 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.85 59.0 5.46e-01 73.0% 57.5%
3090474 4020.1.1.0 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.84 77.0 5.85e-01 100.0% 96.4%
3971154 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 59.0 5.71e-01 73.0% 65.7%
3941460 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 58.0 5.82e-01 73.0% 70.8%
4987929 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 73.0 7.46e-01 95.2% 100.0%
3947091 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.84 60.0 6.14e-01 76.2% 78.3%
3289034 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 58.0 5.89e-01 73.0% 73.0%
4980944 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 57.0 5.24e-01 71.4% 58.7%
5074288 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.83 57.0 5.85e-01 71.4% 75.0%
3977009 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.83 58.0 5.61e-01 73.0% 65.7%
4977403 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 57.0 5.85e-01 71.4% 75.0%
5056682 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.83 58.0 5.60e-01 73.0% 65.7%
4927516 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 57.0 5.82e-01 71.4% 75.0%
3943462 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.82 59.0 6.23e-01 76.2% 87.3%
3588551 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 56.0 5.76e-01 73.0% 75.0%
4458444 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 62.0 5.42e-01 82.5% 54.7%
3972270 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 57.0 5.48e-01 73.0% 65.7%
4926890 101.1.2.140 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.81 55.0 4.86e-01 71.4% 52.2%
3967891 101.1.2.1 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.80 55.0 5.00e-01 73.0% 54.1%
4937081 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.80 65.0 6.50e-01 92.1% 84.6%
4560931 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.78 58.0 5.49e-01 81.0% 66.7%
5058647 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 56.0 4.90e-01 74.6% 95.6%
3927372 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 53.0 4.86e-01 71.4% 71.2%
1291586 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.77 55.0 4.23e-01 76.2% 48.9%
5020331 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 54.0 5.41e-01 74.6% 84.6%
4270690 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 53.0 5.42e-01 73.0% 76.7%
5030780 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.75 51.0 5.61e-01 71.4% 92.0%
4002905 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 52.0 5.22e-01 73.0% 70.8%
5028266 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 48.0 5.01e-01 71.4% 72.9%
3509159 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.74 48.0 4.98e-01 71.4% 71.7%
3932988 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 50.0 5.33e-01 71.4% 100.0%
3544647 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.73 48.0 4.82e-01 71.4% 66.2%
3794969 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 49.0 5.26e-01 73.0% 90.0%
3753093 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.69 47.0 4.65e-01 73.0% 67.7%
3693312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 48.0 4.96e-01 74.6% 83.3%
4002185 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.69 47.0 4.44e-01 71.4% 58.7%
4993585 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.65 52.0 5.32e-01 85.7% 93.3%
4061395 190.1.1.0 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box 0.58 53.0 4.97e-01 100.0% 90.7%