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NC_073091.1__YP_010742720.1__P9653_gp51__00051

Bact-Vir

NC_073091.1__YP_010742720.1__P9653_gp51__00051

Identity

Accession:
NC_073091 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Theosmithvirus› Bacillus_phage_0105phi7-2

TaxID: 3025408

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-175
PDB
Domain cluster: rep: OL614104.1__UIS74655.1__X__00096__D85-206
D2 high residues 193-252
PDB
Domain cluster: rep: KM083128.1__AII28201.1__PBI_SPARKY_57__00053__D196-256
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b7hA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.73 55.0 5.14e-01 83.3% 80.3%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 36.0 3.62e-01 85.0% 50.8%
6az1a00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 40.0 3.80e-01 90.0% 50.0%
1miwA04 1.10.246.80 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.66 48.0 4.75e-01 80.0% 71.9%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.66 45.0 4.12e-01 71.7% 79.0%
2qeuB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.65 55.0 4.33e-01 98.3% 48.1%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.62 47.0 4.37e-01 86.7% 75.3%
2hqbA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 43.0 3.27e-01 76.7% 100.0%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.60 51.0 4.48e-01 91.7% 97.7%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 49.0 3.70e-01 90.0% 38.2%
4akgA06 1.10.8.710 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain 0.60 50.0 4.23e-01 98.3% 66.4%
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.59 47.0 3.43e-01 90.0% 91.3%
2n80A00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.59 42.0 3.74e-01 91.7% 50.0%
7wf8B01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.58 47.0 3.85e-01 91.7% 47.1%
1i7dA04 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.58 40.0 3.24e-01 75.0% 98.4%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 47.0 4.37e-01 95.0% 73.1%
4mloA01 2.60.120.810 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.33e-01 90.0% 98.1%
4qbuA02 3.40.366.10 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 0.53 46.0 3.12e-01 100.0% 64.7%
3nbiA01 1.10.8.1020 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › RecQ-mediated genome instability protein 1, N-terminal domain 0.52 45.0 4.61e-01 98.3% 100.0%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.29e-01 88.3% 82.1%
1gt0D00 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.52 36.0 3.39e-01 83.3% 57.0%
3id7A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 43.0 2.70e-01 100.0% 93.4%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 31.0 3.23e-01 75.0% 67.3%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
166410 101.1.4.17 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.73 55.0 5.14e-01 83.3% 80.3%
5068881 210.1.2.0 ↗ a+b four layers › Ntn/PP2C › Ntn › Penicillin acylase, catalytic domain 0.68 58.0 3.47e-01 95.0% 43.8%
3173158 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 43.0 4.59e-01 90.0% 80.0%
3167163 101.1.2.65 ↗ alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.65 45.0 3.89e-01 71.7% 67.4%
3698332 103.1.1.7 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_2 0.63 46.0 4.29e-01 81.7% 61.3%
5051872 873.1.1.12 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 0.62 42.0 3.38e-01 73.3% 35.0%
4959470 873.1.1.12 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › PF27313 0.59 40.0 3.27e-01 71.7% 37.5%
2970332 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.56 50.0 3.76e-01 100.0% 62.2%
3246448 223.2.1.6 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › uDENN 0.54 45.0 3.01e-01 90.0% 35.1%
3928773 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.54 39.0 3.63e-01 76.7% 86.7%
3505284 386.1.1.19 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_2 0.53 46.0 3.95e-01 100.0% 93.0%