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NC_073094.1__YP_010742899.1__QAY90_gp19__00019
Bact-VirNC_073094.1__YP_010742899.1__QAY90_gp19__00019
Identity
- Accession:
- NC_073094 ↗
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Taxonomy
TaxID: 2939129
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-77
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yu4A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.68 | 46.0 | 3.82e-01 | 71.2% | 50.0% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.64 | 53.0 | 4.19e-01 | 98.1% | 92.5% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.63 | 37.0 | 2.89e-01 | 78.8% | 25.5% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 44.0 | 3.42e-01 | 78.8% | 35.7% |
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.60 | 36.0 | 3.95e-01 | 73.1% | 77.5% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 43.0 | 4.02e-01 | 90.4% | 59.7% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 42.0 | 3.27e-01 | 80.8% | 97.5% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 45.0 | 3.53e-01 | 92.3% | 66.7% |
| 2ckkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 38.0 | 3.84e-01 | 96.2% | 69.8% |
| 1xzpB00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.56 | 46.0 | 3.50e-01 | 92.3% | 77.1% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 3.75e-01 | 75.0% | 92.1% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 36.0 | 3.81e-01 | 98.1% | 74.5% |
| 5l37C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.55 | 40.0 | 3.51e-01 | 80.8% | 91.9% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 3.72e-01 | 82.7% | 61.1% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 36.0 | 3.57e-01 | 96.2% | 61.0% |
| 4arvA02 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 45.0 | 3.42e-01 | 94.2% | 56.3% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.53 | 36.0 | 3.26e-01 | 71.2% | 79.2% |
| 1nigA00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.53 | 37.0 | 2.76e-01 | 76.9% | 69.2% |
| 1k1zA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 35.0 | 3.26e-01 | 96.2% | 48.7% |
| 4joiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 2.89e-01 | 82.7% | 91.5% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.41e-01 | 88.5% | 80.0% |
| 5ljvA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 42.0 | 2.97e-01 | 92.3% | 39.4% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 41.0 | 3.90e-01 | 96.2% | 89.4% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.51 | 35.0 | 3.13e-01 | 73.1% | 50.0% |
| 3rauA00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.51 | 41.0 | 2.59e-01 | 100.0% | 95.0% |
| 2oap202 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 2.54e-01 | 84.6% | 86.3% |
| 5c3vA01 | 3.30.800.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta | 0.50 | 33.0 | 2.44e-01 | 88.5% | 21.0% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3206375 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.77 | 49.0 | 4.88e-01 | 71.2% | 61.8% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.73 | 53.0 | 4.46e-01 | 76.9% | 64.7% |
| 3825851 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.71 | 49.0 | 4.44e-01 | 73.1% | 60.0% |
| 3241153 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 57.0 | 3.97e-01 | 90.4% | 73.8% |
| 5065494 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 45.0 | 4.65e-01 | 73.1% | 76.0% |
| 3928378 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 51.0 | 4.38e-01 | 88.5% | 54.1% |
| 3401149 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 51.0 | 3.41e-01 | 88.5% | 38.0% |
| 3707372 | 7039.1.1.0 ↗ | a+b complex topology › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM › Helical domain of PCIF1/CAPAM | 0.63 | 52.0 | 3.33e-01 | 92.3% | 92.7% |
| 3399001 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 49.0 | 4.36e-01 | 90.4% | 95.0% |
| 3221156 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.62 | 45.0 | 4.45e-01 | 76.9% | 72.7% |
| 5051552 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 51.0 | 4.22e-01 | 96.2% | 77.0% |
| 3907024 | 260.1.1.1 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin | 0.62 | 45.0 | 2.78e-01 | 76.9% | 59.4% |
| 1563689 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.62 | 44.0 | 3.41e-01 | 78.8% | 35.4% |
| 5013117 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 4.08e-01 | 76.9% | 67.7% |
| 3403345 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 3.59e-01 | 100.0% | 43.8% |
| 3404356 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 48.0 | 3.19e-01 | 88.5% | 36.8% |
| 4952347 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 42.0 | 3.64e-01 | 75.0% | 92.9% |
| 4678702 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.60 | 43.0 | 3.35e-01 | 78.8% | 37.6% |
| 5052405 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 51.0 | 4.22e-01 | 94.2% | 75.3% |
| 3725701 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.59 | 45.0 | 3.05e-01 | 82.7% | 35.5% |
| 3388463 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.59 | 49.0 | 3.71e-01 | 100.0% | 53.8% |
| 4227809 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.59 | 42.0 | 3.19e-01 | 76.9% | 31.1% |
| 4213802 | 3304.1.1.2 ↗ | a+b two layers › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › Cellular targeting domain in sucrose synthase-1 › SUS_N | 0.59 | 41.0 | 3.13e-01 | 76.9% | 32.1% |
| None | — | 0.58 | 49.0 | 2.98e-01 | 96.2% | 79.1% | |
| 3396002 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 48.0 | 3.35e-01 | 98.1% | 38.5% |
| 3405299 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 45.0 | 3.16e-01 | 100.0% | 36.9% |
| 3992132 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.57 | 50.0 | 3.26e-01 | 100.0% | 94.3% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.56 | 37.0 | 3.84e-01 | 94.2% | 71.4% |
| 3403082 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 46.0 | 3.22e-01 | 100.0% | 38.4% |
| 3415237 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 2.93e-01 | 88.5% | 35.8% |
| 3946211 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.55 | 44.0 | 3.95e-01 | 94.2% | 91.3% |
| 3567461 | 260.1.1.1 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin | 0.55 | 48.0 | 3.00e-01 | 100.0% | 21.3% |
| 3711282 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 37.0 | 3.73e-01 | 92.3% | 65.5% |
| 4122616 | 4337.1.1.0 ↗ | a+b two layers › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain › DNA mismatch repair protein MutL dimerization subdomain | 0.54 | 43.0 | 3.56e-01 | 86.5% | 81.1% |
| 5079023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 38.0 | 4.02e-01 | 96.2% | 86.7% |
| 3424116 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.54 | 44.0 | 3.49e-01 | 96.2% | 59.2% |
| 5063615 | 101.22.1.0 ↗ | alpha arrays › HTH › IscX-like (DEPRECATED) › IscX-like (DEPRECATED) | 0.54 | 39.0 | 3.46e-01 | 76.9% | 93.3% |
| 4454944 | 101.1.2.468 ↗ | alpha arrays › HTH › HTH › winged helix domain › McbB | 0.53 | 37.0 | 3.32e-01 | 88.5% | 48.8% |
| 3481726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 36.0 | 3.52e-01 | 88.5% | 63.3% |
| 3731905 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 40.0 | 3.75e-01 | 80.8% | 92.3% |
| 4998833 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.53 | 43.0 | 3.28e-01 | 100.0% | 35.9% |
| 3333592 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 41.0 | 2.78e-01 | 86.5% | 41.0% |
| 3494371 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 44.0 | 3.16e-01 | 96.2% | 44.8% |
| 3232394 | 109.4.1.264 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RMD1-3 | 0.52 | 46.0 | 2.84e-01 | 100.0% | 20.9% |
| 3585382 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 38.0 | 2.25e-01 | 82.7% | 66.8% |
| 3755591 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 36.0 | 3.37e-01 | 88.5% | 58.5% |
| 3494554 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 42.0 | 3.55e-01 | 94.2% | 74.7% |
| 5081200 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 38.0 | 3.67e-01 | 82.7% | 68.3% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.51 | 39.0 | 3.65e-01 | 86.5% | 95.4% |