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NC_073324.1__YP_010749658.1__QCF79_gp78__00078
Bact-VirNC_073324.1__YP_010749658.1__QCF79_gp78__00078
Identity
- Accession:
- NC_073324 ↗
- Kingdom:
- phage
Quality
85.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Sarkviridae›
Kagunavirus›
Escherichia_phage_vB_EcoS-22664BS2
TaxID: 2865787
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-50
Domain cluster:
rep: MH443101.1__AXH43579.1__MZUP2_610__00061__D3-56
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26207.1 best | Phage_phiTE_015 | 39.3 | 9.30e-10 | 83.3% | 46.2% |
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qozB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.76 | 47.0 | 2.99e-01 | 97.9% | 13.5% |
| 3aleA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.69 | 47.0 | 3.36e-01 | 97.9% | 23.8% |
| 3l86A00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.66 | 53.0 | 3.44e-01 | 97.9% | 30.6% |
| 1xb4B01 | 1.10.10.570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › """Winged helix"" DNA-binding domain. Chain C. Domain 1" | 0.66 | 48.0 | 3.74e-01 | 100.0% | 36.5% |
| 4at7B02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 55.0 | 3.73e-01 | 97.9% | 40.8% |
| 5z4zC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.34e-01 | 91.7% | 80.7% |
| 3lnrA00 | 1.20.120.1530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 42.0 | 2.90e-01 | 91.7% | 20.0% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 49.0 | 4.22e-01 | 91.7% | 82.4% |
| 2nr7A00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.63 | 55.0 | 3.67e-01 | 100.0% | 56.7% |
| 2db7A01 | 6.10.250.980 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 45.0 | 4.45e-01 | 89.6% | 71.7% |
| 1akhB00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 42.0 | 3.60e-01 | 72.9% | 76.9% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 50.0 | 3.11e-01 | 95.8% | 84.2% |
| 7vjmB01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 47.0 | 4.28e-01 | 85.4% | 76.6% |
| 3dz1A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 50.0 | 3.11e-01 | 97.9% | 84.4% |
| 5xnsC00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.60 | 40.0 | 3.64e-01 | 77.1% | 48.6% |
| 2fyfA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.60 | 48.0 | 3.84e-01 | 93.8% | 55.2% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 49.0 | 3.97e-01 | 95.8% | 55.0% |
| 2looA02 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.59 | 47.0 | 4.09e-01 | 97.9% | 57.3% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.59 | 50.0 | 3.67e-01 | 97.9% | 50.4% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 47.0 | 3.77e-01 | 100.0% | 62.3% |
| 3d0cB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 50.0 | 3.10e-01 | 100.0% | 29.3% |
| 2olnA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 47.0 | 3.17e-01 | 100.0% | 63.5% |
| 5ddtA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 47.0 | 3.16e-01 | 100.0% | 85.8% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.57 | 43.0 | 3.68e-01 | 81.2% | 88.0% |
| 4dwlA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.56 | 41.0 | 3.41e-01 | 89.6% | 82.4% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 48.0 | 3.63e-01 | 97.9% | 69.5% |
| 2v4jC01 | 3.30.1420.10 | Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain | 0.54 | 33.0 | 3.54e-01 | 81.2% | 71.8% |
| 1o3uA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.54 | 45.0 | 3.46e-01 | 100.0% | 70.0% |
| 3swhA01 | 1.10.357.50 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › | 0.53 | 46.0 | 3.20e-01 | 100.0% | 32.1% |
| 3iwaA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 45.0 | 2.90e-01 | 97.9% | 50.6% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 41.0 | 3.27e-01 | 97.9% | 87.0% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.52 | 42.0 | 3.85e-01 | 95.8% | 95.5% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 42.0 | 3.97e-01 | 97.9% | 75.9% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943336 | 7531.1.1.1 ↗ | a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase | 0.69 | 57.0 | 3.58e-01 | 100.0% | 26.6% |
| 3587655 | 829.1.1.0 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB | 0.66 | 54.0 | 4.86e-01 | 100.0% | 65.3% |
| 5077187 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.66 | 56.0 | 3.83e-01 | 100.0% | 83.9% |
| 3811150 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.64 | 55.0 | 4.82e-01 | 100.0% | 72.0% |
| 3613349 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.61 | 49.0 | 3.40e-01 | 89.6% | 27.9% |
| 4249869 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.60 | 49.0 | 3.12e-01 | 97.9% | 92.8% |
| 3818733 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.60 | 44.0 | 3.18e-01 | 89.6% | 26.9% |
| 4369430 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.59 | 49.0 | 3.09e-01 | 100.0% | 29.0% |
| 4003864 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.59 | 49.0 | 3.87e-01 | 100.0% | 81.8% |
| 4611567 | 2002.1.1.29 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHDPS | 0.59 | 47.0 | 3.00e-01 | 97.9% | 91.2% |
| 3405001 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.59 | 48.0 | 3.54e-01 | 89.6% | 46.4% |
| 4449193 | 1134.1.2.0 ↗ | alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Archaeal C-Ala helical domain | 0.58 | 46.0 | 4.44e-01 | 97.9% | 74.5% |
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.58 | 40.0 | 4.00e-01 | 100.0% | 69.8% |
| 3607313 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 51.0 | 3.54e-01 | 97.9% | 36.1% |
| 3656214 | 223.2.1.9 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N | 0.58 | 49.0 | 3.46e-01 | 95.8% | 56.1% |
| 3207317 | 192.7.1.23 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › zf-C4pol | 0.58 | 45.0 | 3.55e-01 | 87.5% | 41.0% |
| 3513717 | 3721.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain › Protein regulator of cytokinesis 1 (PRC1) dimerization domain | 0.57 | 48.0 | 4.11e-01 | 91.7% | 62.7% |
| 3592239 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.57 | 43.0 | 3.86e-01 | 83.3% | 60.0% |
| 3351913 | 3238.1.1.1 ↗ | alpha superhelices › Mitochondrial mTERF-like › Mitochondrial mTERF › Mitochondrial mTERF › mTERF | 0.57 | 49.0 | 3.13e-01 | 97.9% | 30.4% |
| 3206688 | 604.1.1.135 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 | 0.57 | 47.0 | 2.94e-01 | 95.8% | 30.2% |
| 3595326 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.56 | 42.0 | 3.80e-01 | 83.3% | 60.0% |
| 4192980 | 7572.1.1.0 ↗ | a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain | 0.56 | 49.0 | 3.39e-01 | 100.0% | 43.5% |
| 3615391 | 3671.1.1.0 ↗ | alpha duplicates or obligate multimers › Translocated intimin receptor Tir extracellular domain › Translocated intimin receptor Tir extracellular domain › Translocated intimin receptor Tir extracellular domain | 0.55 | 42.0 | 3.80e-01 | 85.4% | 58.6% |
| 4286954 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.55 | 50.0 | 4.36e-01 | 100.0% | 71.4% |
| 5079690 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 38.0 | 3.46e-01 | 100.0% | 53.8% |
| 4123079 | 4168.1.1.0 ↗ | alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain | 0.55 | 44.0 | 4.18e-01 | 85.4% | 74.5% |
| 3636705 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.54 | 45.0 | 2.75e-01 | 100.0% | 14.4% |
| 3629005 | 3722.1.1.1 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › MAP65_ASE1 | 0.54 | 44.0 | 2.84e-01 | 91.7% | 19.6% |
| 3995128 | 3722.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain | 0.54 | 43.0 | 2.80e-01 | 89.6% | 18.7% |
| 3924238 | 3722.1.1.0 ↗ | alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain | 0.54 | 46.0 | 2.91e-01 | 93.8% | 19.6% |
| 5029796 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 43.0 | 3.23e-01 | 89.6% | 55.8% |
| 4337722 | 3001.1.1.1 ↗ | alpha arrays › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › Tetrahydrodipicolinate-N-succinlytransferase, N-terminal 3-helical domain › THDPS_N_2 | 0.52 | 38.0 | 3.18e-01 | 77.1% | 45.9% |
| 5063200 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 41.0 | 3.38e-01 | 91.7% | 50.6% |