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NC_073365.1__YP_010751065.1__QDA01_gp47__00057
Bact-VirNC_073365.1__YP_010751065.1__QDA01_gp47__00057
Identity
- Accession:
- NC_073365 ↗
- Kingdom:
- phage
Quality
80.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Hodgkinviridae›
Mementomorivirus›
Microbacterium_phage_Cinna
TaxID: 2591215
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-101
Domain cluster:
rep: MT225100.1__QIW91724.1__Lys8385Vzw_52__00052__D7-75
D2
high
residues 119-159
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 58.0 | 4.40e-01 | 92.7% | 48.5% |
| 4qiwK00 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.69 | 48.0 | 4.36e-01 | 73.2% | 78.6% |
| 1jeyB03 | 1.10.1600.10 | Mainly Alpha › Orthogonal Bundle › Ku70; Chain: A; domain 4 › | 0.67 | 48.0 | 3.67e-01 | 78.0% | 91.2% |
| 2q0oC00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 56.0 | 4.53e-01 | 100.0% | 61.6% |
| 2raeA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 53.0 | 5.26e-01 | 97.6% | 100.0% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.57 | 42.0 | 3.35e-01 | 78.0% | 48.9% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 44.0 | 3.45e-01 | 100.0% | 51.3% |
| 3if4A02 | 1.20.5.1210 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Integron cassette protein helical domain | 0.52 | 45.0 | 4.35e-01 | 97.6% | 95.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3732219 | 109.4.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 | 0.67 | 51.0 | 2.98e-01 | 82.9% | 10.8% |
| 3697275 | 192.29.1.104 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4149 | 0.64 | 52.0 | 3.46e-01 | 95.1% | 97.2% |
| 3405078 | 3226.1.1.2 ↗ | alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Sulfate_transp | 0.58 | 51.0 | 2.93e-01 | 100.0% | 29.2% |