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NC_073366.1__YP_010751160.1__QDA02_gp48__00059

Bact-Vir

NC_073366.1__YP_010751160.1__QDA02_gp48__00059

Identity

Accession:
NC_073366 ↗
Kingdom:
phage

Quality

74.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-59
PDB
Domain cluster: representative
CATH (69)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.90 66.0 5.19e-01 77.6% 41.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 66.0 6.32e-01 81.6% 74.5%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 60.0 5.09e-01 75.5% 47.5%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 59.0 5.53e-01 75.5% 62.3%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 60.0 6.01e-01 79.6% 78.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 59.0 5.47e-01 77.6% 61.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 57.0 5.44e-01 75.5% 64.3%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 59.0 5.74e-01 79.6% 69.6%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 60.0 6.28e-01 81.6% 86.7%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 60.0 5.49e-01 81.6% 60.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 57.0 4.98e-01 75.5% 51.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 5.18e-01 77.6% 56.7%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 58.0 4.87e-01 77.6% 47.5%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 4.97e-01 77.6% 52.9%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 57.0 5.43e-01 77.6% 65.5%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.79 67.0 6.47e-01 98.0% 94.6%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.59e-01 85.7% 71.2%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 5.13e-01 75.5% 59.4%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.78 59.0 4.55e-01 81.6% 40.4%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 52.0 5.69e-01 71.4% 100.0%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 5.10e-01 77.6% 56.7%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 69.0 6.71e-01 100.0% 90.7%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 55.0 4.81e-01 75.5% 49.3%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.78 67.0 4.44e-01 98.0% 79.9%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.78 55.0 3.61e-01 75.5% 18.0%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.76 68.0 4.83e-01 100.0% 62.7%
5douA01 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.76 67.0 4.58e-01 100.0% 28.7%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 4.31e-01 77.6% 41.1%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.75 67.0 4.74e-01 100.0% 84.4%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.74 65.0 4.62e-01 100.0% 50.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 4.41e-01 77.6% 43.2%
3nkhA00 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.74 63.0 4.11e-01 98.0% 72.9%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 4.27e-01 77.6% 41.6%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 54.0 5.57e-01 81.6% 90.9%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 63.0 4.92e-01 100.0% 50.5%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 53.0 4.88e-01 77.6% 60.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 52.0 4.30e-01 75.5% 42.5%
3d7iB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.72 60.0 4.81e-01 93.9% 63.3%
1g3nC01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 63.0 4.76e-01 100.0% 88.3%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 54.0 5.08e-01 81.6% 68.3%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 4.50e-01 77.6% 50.0%
2qeuB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.70 60.0 4.39e-01 98.0% 51.9%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.70 58.0 4.73e-01 95.9% 84.5%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 50.0 5.16e-01 77.6% 87.2%
4d49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.70 58.0 3.68e-01 91.8% 26.1%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.69 60.0 4.79e-01 100.0% 66.3%
1gw5B00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.69 57.0 3.18e-01 91.8% 9.7%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 56.0 5.35e-01 98.0% 85.2%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 3.92e-01 79.6% 37.5%
3ezxA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.68 58.0 4.83e-01 95.9% 90.7%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.68 55.0 4.19e-01 93.9% 93.7%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.68 55.0 3.92e-01 91.8% 38.1%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.68 59.0 4.32e-01 100.0% 85.7%
2k9lA00 1.10.10.1330 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain 0.68 50.0 4.33e-01 79.6% 53.9%
6l25A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.67 57.0 3.62e-01 100.0% 24.7%
3l9tA02 1.25.40.290 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains 0.67 56.0 4.26e-01 95.9% 50.8%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 4.71e-01 100.0% 68.1%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 3.59e-01 79.6% 31.0%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.65 49.0 3.83e-01 81.6% 50.9%
1xwyA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.65 56.0 3.53e-01 100.0% 25.4%
2xioA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.64 54.0 3.38e-01 100.0% 29.4%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 55.0 4.62e-01 100.0% 68.6%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.63 45.0 4.64e-01 81.6% 84.8%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 3.74e-01 79.6% 41.5%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.12e-01 81.6% 62.1%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.60 48.0 3.47e-01 89.8% 39.6%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 51.0 3.45e-01 98.0% 74.6%
3akjA02 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.55 43.0 2.92e-01 91.8% 69.7%
4x00A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 42.0 2.66e-01 93.9% 16.1%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.94 72.0 6.94e-01 81.6% 76.4%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 65.0 7.09e-01 73.5% 90.0%
3969325 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 68.0 5.89e-01 77.6% 55.7%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 66.0 7.20e-01 77.6% 95.0%
4964802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 70.0 6.45e-01 81.6% 70.0%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 69.0 6.66e-01 81.6% 72.7%
4961899 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.90 69.0 6.19e-01 81.6% 61.5%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 69.0 6.89e-01 81.6% 80.0%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 69.0 6.39e-01 81.6% 66.7%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.89 68.0 7.08e-01 81.6% 88.9%
5028266 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 67.0 6.23e-01 79.6% 66.1%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.89 68.0 5.45e-01 81.6% 44.4%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 67.0 6.98e-01 81.6% 88.9%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 67.0 6.95e-01 81.6% 88.9%
4146353 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.87 63.0 5.31e-01 77.6% 48.8%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.87 64.0 6.92e-01 79.6% 97.5%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 79.0 6.21e-01 100.0% 69.5%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.86 66.0 5.74e-01 81.6% 57.7%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 65.0 6.27e-01 81.6% 72.7%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.86 67.0 6.02e-01 83.7% 63.1%
4165809 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.86 79.0 6.42e-01 100.0% 77.6%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.85 62.0 5.60e-01 77.6% 59.1%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.85 63.0 6.06e-01 79.6% 70.9%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.85 61.0 6.35e-01 77.6% 84.4%
4347676 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.85 77.0 6.19e-01 100.0% 73.3%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.84 66.0 6.12e-01 83.7% 68.3%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.84 63.0 6.50e-01 81.6% 86.7%
3278077 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 74.0 6.96e-01 100.0% 90.0%
4965845 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.83 76.0 4.94e-01 100.0% 78.9%
4963467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 63.0 6.55e-01 81.6% 88.9%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.83 62.0 5.95e-01 81.6% 70.9%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.83 62.0 5.66e-01 81.6% 61.5%
4197050 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.83 74.0 5.71e-01 100.0% 62.9%
3506991 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.82 73.0 5.17e-01 100.0% 51.7%
4997092 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 64.0 5.68e-01 100.0% 60.0%
1035813 101.1.6.2 alpha arrays › HTH › HTH › TrpR › HTH_7 0.81 59.0 5.88e-01 79.6% 75.0%
3815501 101.1.10.37 alpha arrays › HTH › HTH › Cyclin-like › PF26138 0.81 70.0 5.52e-01 93.9% 86.3%
3204806 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 60.0 6.28e-01 81.6% 88.9%
3977374 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 69.0 6.72e-01 98.0% 98.2%
3967757 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.80 58.0 5.03e-01 77.6% 50.7%
5016203 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.80 72.0 4.93e-01 100.0% 49.4%
3656429 101.1.1.267 alpha arrays › HTH › HTH › Three-helical HTH › PF26138 0.80 68.0 4.41e-01 93.9% 40.5%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.79 57.0 5.43e-01 79.6% 65.0%
5082923 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 70.0 5.44e-01 100.0% 66.7%
4967740 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 61.0 5.94e-01 85.7% 80.0%
4964523 101.1.1.538 alpha arrays › HTH › HTH › Three-helical HTH › CPSase_L_D3 0.79 70.0 4.94e-01 100.0% 46.2%
3944370 101.1.1.318 alpha arrays › HTH › HTH › Three-helical HTH › PF30335 0.79 68.0 6.12e-01 100.0% 77.1%
4355360 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.78 68.0 4.83e-01 100.0% 34.0%
5062650 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.78 69.0 5.14e-01 100.0% 57.6%
5067887 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.78 70.0 5.17e-01 100.0% 39.2%
4518397 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.78 68.0 4.82e-01 100.0% 33.3%
3942571 101.1.1.198 alpha arrays › HTH › HTH › Three-helical HTH › KorB 0.78 68.0 6.23e-01 100.0% 84.6%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 58.0 5.99e-01 81.6% 88.9%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 69.0 6.71e-01 100.0% 90.7%
3670113 101.1.1.129 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_4 0.78 70.0 5.65e-01 100.0% 91.1%
4952293 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.77 57.0 6.07e-01 81.6% 97.5%
3239778 4156.1.1.5 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › POLQ_helical 0.77 65.0 4.51e-01 93.9% 51.9%
4411930 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.77 68.0 4.85e-01 100.0% 49.7%
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 55.0 5.72e-01 79.6% 86.7%
3971636 101.28.1.0 alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins 0.76 56.0 5.93e-01 79.6% 100.0%
4999499 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 5.38e-01 100.0% 83.2%
4012680 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 4.68e-01 98.0% 50.7%
3386943 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.76 67.0 5.02e-01 100.0% 60.8%
5072357 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.76 67.0 5.38e-01 100.0% 84.2%
4947271 101.1.2.936 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D1 0.76 67.0 4.71e-01 100.0% 31.6%
4006611 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.75 66.0 4.66e-01 100.0% 48.4%
3519938 4156.1.1.5 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › POLQ_helical 0.75 68.0 4.54e-01 100.0% 47.4%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.75 55.0 4.50e-01 81.6% 43.2%
4376172 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.75 63.0 4.48e-01 100.0% 30.6%
4373651 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.75 65.0 4.81e-01 100.0% 54.6%
4125982 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.75 65.0 4.41e-01 100.0% 38.9%
3926525 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 55.0 5.88e-01 81.6% 100.0%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 54.0 4.86e-01 79.6% 57.1%
5040755 101.1.1.251 alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB 0.74 64.0 5.06e-01 100.0% 52.4%
3592377 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 4.61e-01 100.0% 32.7%
4466009 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.74 66.0 4.39e-01 100.0% 37.3%
4487472 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.73 63.0 4.60e-01 95.9% 60.0%
4973961 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 62.0 5.07e-01 100.0% 52.6%
4934943 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.73 62.0 5.16e-01 95.9% 90.6%
4930916 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.72 61.0 5.08e-01 93.9% 89.4%
3927372 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 62.0 5.31e-01 100.0% 90.0%
5073460 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.71 62.0 5.06e-01 98.0% 88.9%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.71 60.0 4.93e-01 95.9% 76.7%
4971674 4995.1.1.1 alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.70 60.0 5.10e-01 95.9% 97.5%
3278832 106.1.1.11 alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N 0.70 62.0 4.49e-01 100.0% 86.7%
4987624 102.1.1.119 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DUF4332 0.68 52.0 4.54e-01 83.7% 64.0%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.65 56.0 5.02e-01 98.0% 71.4%
4613072 101.1.2.721 alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113 0.62 54.0 3.77e-01 100.0% 36.4%
3611121 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 49.0 3.23e-01 93.9% 23.3%
3607629 4156.1.1.11 alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › HA2_N 0.54 42.0 2.94e-01 100.0% 22.3%
D2 high residues 120-189
PDB
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qeuB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.75 53.0 4.27e-01 74.3% 57.9%
1vkeB00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.70 54.0 4.77e-01 82.9% 73.3%
2fji102 1.10.357.70 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Exocyst complex component Sec6, C-terminal domain 0.68 58.0 4.31e-01 97.1% 85.8%
6a7hA01 1.20.140.180 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.68 54.0 4.37e-01 85.7% 66.7%
8a0rA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.67 47.0 3.85e-01 74.3% 63.1%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.66 52.0 4.50e-01 85.7% 65.2%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 45.0 3.96e-01 71.4% 92.3%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.65 49.0 3.62e-01 81.4% 75.3%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.65 52.0 3.96e-01 91.4% 75.0%
3d5lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 38.0 4.57e-01 77.1% 93.3%
2prrA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 48.0 3.92e-01 81.4% 95.3%
1sumB02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.62 47.0 4.05e-01 82.9% 90.7%
2d9jA02 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.62 43.0 4.18e-01 72.9% 74.7%
2fbnA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.60 47.0 3.66e-01 84.3% 63.4%
4hz4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.60 45.0 3.97e-01 84.3% 62.5%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 50.0 4.74e-01 94.3% 96.5%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.59 42.0 3.45e-01 74.3% 70.5%
4gyoB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 46.0 3.75e-01 87.1% 91.4%
4dlqA02 1.25.40.610 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 41.0 3.76e-01 77.1% 77.9%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 44.0 4.09e-01 88.6% 75.5%
1khdA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 39.0 3.55e-01 74.3% 99.0%
4gtnA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.55 38.0 3.81e-01 74.3% 81.1%
2of7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.54 40.0 3.34e-01 82.9% 98.6%
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.52 44.0 3.85e-01 97.1% 71.7%
2qffA00 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.51 34.0 3.45e-01 71.4% 73.0%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.50 36.0 3.17e-01 75.7% 88.8%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4518397 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.77 68.0 5.26e-01 97.1% 71.3%
3941922 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 50.0 5.43e-01 70.0% 100.0%
5027258 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.73 54.0 4.44e-01 77.1% 60.8%
5072693 608.1.1.1 alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.73 54.0 4.65e-01 78.6% 66.7%
3183264 608.1.1.0 alpha arrays › AhpD-like › AhpD-like › AhpD-like 0.71 59.0 4.08e-01 91.4% 94.0%
4589038 5001.1.1.6 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin 0.71 55.0 3.84e-01 84.3% 52.9%
2393375 633.16.1.1 alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › MLD 0.70 51.0 4.87e-01 75.7% 80.0%
3358179 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.67 49.0 3.91e-01 77.1% 67.9%
3903390 109.4.1.613 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Asp_Glu_race_2 0.67 47.0 3.54e-01 74.3% 42.9%
2773532 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 48.0 3.51e-01 81.4% 51.6%
3810254 633.4.1.0 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.63 50.0 3.89e-01 88.6% 55.6%
2771114 109.1.1.6 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.62 47.0 3.83e-01 82.9% 71.5%
3466815 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 49.0 3.99e-01 87.1% 95.6%
3801560 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.59 43.0 2.83e-01 78.6% 76.7%
3381228 109.27.1.3 alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › NPH3 0.59 46.0 3.78e-01 87.1% 66.7%
3551508 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 45.0 3.63e-01 84.3% 42.1%
3460477 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.57 45.0 3.86e-01 87.1% 89.6%
4335806 4266.2.1.1 alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › DUF309 0.56 47.0 3.93e-01 98.6% 74.8%
3198591 109.59.1.7 alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › PPR_2 0.56 43.0 3.76e-01 94.3% 55.2%
5027312 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.53 39.0 3.58e-01 82.9% 98.1%