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NC_073373.1__YP_010751778.1__QDA09_gp33__00033
Bact-VirNC_073373.1__YP_010751778.1__QDA09_gp33__00033
Identity
- Accession:
- NC_073373 ↗
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Hodgkinviridae›
Metamorphoovirus›
Microbacterium_phage_Tyrumbra
TaxID: 2596974
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-59
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e52B01 | 3.40.91.70 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Type II restriction endonuclease, HindIII | 0.57 | 48.0 | 3.33e-01 | 100.0% | 59.4% |
| 2losA00 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.54 | 37.0 | 3.04e-01 | 73.7% | 41.1% |
| 2n1fA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 42.0 | 3.71e-01 | 93.0% | 87.6% |
| 3cuxA02 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.52 | 36.0 | 2.91e-01 | 73.7% | 35.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3592236 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.58 | 38.0 | 3.40e-01 | 70.2% | 45.9% |
| 3495806 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 41.0 | 2.39e-01 | 80.7% | 14.3% |
| 3606516 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.51e-01 | 71.9% | 56.0% |
| 3575885 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.51 | 35.0 | 3.02e-01 | 73.7% | 50.5% |