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NC_073376.1__YP_010752072.1__QDA12_gp44__00044
Bact-VirNC_073376.1__YP_010752072.1__QDA12_gp44__00044
Identity
- Accession:
- NC_073376 ↗
- Kingdom:
- phage
Quality
61.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Hodgkinviridae›
Metamorphoovirus›
Microbacterium_phage_Teamocil
TaxID: 2656554
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-130
Domain cluster:
rep: MN988551.1__QIG76012.1__EVC23_013__00013__D17-123
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hz9A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.78 | 68.0 | 7.09e-01 | 100.0% | 100.0% |
| 6biqC01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.77 | 68.0 | 6.97e-01 | 93.0% | 100.0% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.76 | 71.0 | 6.70e-01 | 98.4% | 92.6% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.76 | 68.0 | 5.89e-01 | 93.8% | 94.1% |
| 3h41A03 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.76 | 70.0 | 7.11e-01 | 100.0% | 100.0% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 67.0 | 6.90e-01 | 98.4% | 98.4% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 67.0 | 5.59e-01 | 96.1% | 79.9% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 68.0 | 6.24e-01 | 100.0% | 99.4% |
| 4fdyA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 69.0 | 6.78e-01 | 100.0% | 95.5% |
| 2k1gA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 66.0 | 6.67e-01 | 100.0% | 96.9% |
| 4hffA00 | 3.90.1720.70 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.67 | 62.0 | 5.83e-01 | 100.0% | 98.7% |
| 2jtcA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.67 | 59.0 | 4.72e-01 | 96.1% | 98.4% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.63 | 51.0 | 5.13e-01 | 88.3% | 100.0% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.59 | 50.0 | 4.87e-01 | 93.0% | 92.9% |
| 3k6yA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 27.0 | 3.09e-01 | 94.5% | 57.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 45.0 | 4.63e-01 | 88.3% | 90.4% |
| 6iikB00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 47.0 | 3.57e-01 | 94.5% | 99.4% |
| 5hvqC01 | 3.90.1150.220 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.53 | 32.0 | 3.83e-01 | 82.8% | 96.2% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.53 | 23.0 | 3.43e-01 | 74.2% | 100.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 31.0 | 3.77e-01 | 83.6% | 100.0% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.78 | 71.0 | 6.67e-01 | 96.1% | 92.7% |
| 1094909 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 68.0 | 7.09e-01 | 100.0% | 100.0% |
| 4373825 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.78 | 67.0 | 6.89e-01 | 94.5% | 94.4% |
| 4277582 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.77 | 69.0 | 6.81e-01 | 94.5% | 97.0% |
| 3971907 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.76 | 70.0 | 6.94e-01 | 98.4% | 98.5% |
| 1489617 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.75 | 68.0 | 6.81e-01 | 98.4% | 93.8% |
| 1228348 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.75 | 68.0 | 5.76e-01 | 96.9% | 85.9% |
| 3979648 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.75 | 69.0 | 6.67e-01 | 100.0% | 93.8% |
| 1905738 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.74 | 69.0 | 6.53e-01 | 100.0% | 100.0% |
| 3980140 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.74 | 65.0 | 6.45e-01 | 93.8% | 90.4% |
| 4476649 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.74 | 69.0 | 6.79e-01 | 99.2% | 95.6% |
| 3517692 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.74 | 67.0 | 6.81e-01 | 98.4% | 98.4% |
| 3598532 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.73 | 66.0 | 5.58e-01 | 96.1% | 90.2% |
| 3282002 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.70 | 64.0 | 5.15e-01 | 98.4% | 68.5% |
| 3975571 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.65 | 59.0 | 5.16e-01 | 100.0% | 81.6% |
| 5040936 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 54.0 | 5.08e-01 | 96.9% | 100.0% |
| 4261492 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.61 | 53.0 | 5.26e-01 | 95.3% | 95.6% |
| 3385461 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.60 | 51.0 | 4.91e-01 | 93.0% | 100.0% |
| 3963455 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.60 | 50.0 | 4.87e-01 | 93.0% | 100.0% |
| 5056599 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.59 | 53.0 | 5.03e-01 | 97.7% | 98.7% |
| 2570822 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.59 | 51.0 | 4.98e-01 | 96.9% | 93.1% |
| 3970579 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.59 | 50.0 | 4.82e-01 | 95.3% | 96.0% |
| 3718903 | 219.1.1.50 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH_1 | 0.58 | 49.0 | 3.54e-01 | 94.5% | 73.3% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 36.0 | 4.30e-01 | 85.9% | 95.3% |
| 4942673 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.56 | 38.0 | 4.05e-01 | 97.7% | 80.0% |
| 3938589 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.56 | 24.0 | 3.60e-01 | 71.1% | 100.0% |
| 3578208 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 26.0 | 3.59e-01 | 72.7% | 100.0% |
| 4844109 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.54 | 25.0 | 3.10e-01 | 73.4% | 71.8% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.54 | 25.0 | 3.50e-01 | 75.8% | 98.2% |
| 3900017 | 4.1.1.284 ↗ | beta barrels › SH3 › SH3 › SH3 › SBNO | 0.54 | 33.0 | 3.47e-01 | 87.5% | 65.0% |
| 3404936 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.54 | 23.0 | 3.47e-01 | 71.1% | 100.0% |
| 4009281 | 219.1.1.65 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like | 0.53 | 40.0 | 4.35e-01 | 85.2% | 99.0% |
| 3407854 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 37.0 | 4.09e-01 | 99.2% | 95.8% |
| 3408327 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 34.0 | 3.88e-01 | 85.9% | 92.2% |
| 3546607 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.51 | 23.0 | 3.26e-01 | 93.0% | 100.0% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 34.0 | 3.93e-01 | 89.1% | 96.7% |
| 3845425 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 33.0 | 3.75e-01 | 86.7% | 91.1% |
| 5032178 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.51 | 43.0 | 3.58e-01 | 94.5% | 74.0% |
D2
medium
residues 140-209_228-268