←Back to structures
NC_073376.1__YP_010752113.1__QDA12_gp85__00085
Bact-VirNC_073376.1__YP_010752113.1__QDA12_gp85__00085
Identity
- Accession:
- NC_073376 ↗
- Kingdom:
- phage
Quality
68.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Hodgkinviridae›
Metamorphoovirus›
Microbacterium_phage_Teamocil
TaxID: 2656554
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-66_83-101
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 32.0 | 2.95e-01 | 75.3% | 36.8% |
| 7bqiA01 | 1.20.58.900 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RUN domain | 0.53 | 36.0 | 2.99e-01 | 70.4% | 74.2% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.51 | 36.0 | 3.90e-01 | 75.3% | 89.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3740646 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.55 | 27.0 | 2.79e-01 | 74.1% | 43.8% |
| 3961155 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.53 | 36.0 | 3.16e-01 | 72.8% | 96.3% |
| 3684763 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.52 | 41.0 | 2.51e-01 | 86.4% | 50.0% |
| 3414053 | 109.4.1.1532 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › LINES_N, LINES_C | 0.51 | 39.0 | 2.44e-01 | 84.0% | 24.3% |