←Back to structures
NC_073460.1__YP_010754420.1__QEH34_gp23__00023
Bact-VirNC_073460.1__YP_010754420.1__QEH34_gp23__00023
Identity
- Accession:
- NC_073460 ↗
- Kingdom:
- phage
Quality
72.1
mean pLDDT
Taxonomy
TaxID: 2836048
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-128
Domain cluster:
rep: NC_023549.1__YP_009004248.1__CN1A_36__00036__D3-130
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vo9A01 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.80 | 72.0 | 7.02e-01 | 95.1% | 95.5% |
| 5hnmC00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.79 | 74.0 | 6.44e-01 | 100.0% | 80.3% |
| 4mphA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.77 | 73.0 | 6.27e-01 | 100.0% | 77.3% |
| 1lbuA02 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.63 | 56.0 | 5.52e-01 | 98.4% | 92.2% |
| 3eucA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.62 | 33.0 | 3.23e-01 | 98.4% | 46.0% |
| 1vkuA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.53 | 34.0 | 3.94e-01 | 91.9% | 91.8% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589476 | 307.1.1.3 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › VanY | 0.76 | 70.0 | 5.54e-01 | 100.0% | 58.3% |
| 1293086 | 307.1.1.3 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › VanY | 0.75 | 66.0 | 5.72e-01 | 93.5% | 67.9% |
| 3256406 | 307.1.1.2 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Peptidase_M15 | 0.75 | 70.0 | 5.74e-01 | 99.2% | 81.0% |
| 4939067 | 7523.1.1.23 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PBP_like_2 | 0.52 | 42.0 | 4.16e-01 | 88.6% | 97.8% |
D2
high
residues 169-219