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NC_073464.1__YP_010754837.1__QEH38_gp48__00048
Bact-VirNC_073464.1__YP_010754837.1__QEH38_gp48__00048
Identity
- Accession:
- NC_073464 ↗
- Kingdom:
- phage
Quality
81.9
mean pLDDT
Taxonomy
TaxID: 2588512
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-58
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qaoA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.83 | 71.0 | 5.18e-01 | 100.0% | 37.1% |
| 6uvuA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.28e-01 | 100.0% | 51.0% |
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 51.0 | 4.35e-01 | 100.0% | 62.1% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.33e-01 | 92.9% | 70.8% |
| 3m8eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.25e-01 | 100.0% | 54.5% |
| 1stzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 50.0 | 4.46e-01 | 100.0% | 65.9% |
| 3f6oB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.01e-01 | 98.2% | 53.8% |
| 4gyiA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.28e-01 | 100.0% | 61.3% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 49.0 | 4.20e-01 | 98.2% | 57.4% |
| 3qphA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.31e-01 | 89.3% | 40.2% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 46.0 | 4.08e-01 | 89.3% | 68.2% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 4.15e-01 | 100.0% | 59.1% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 47.0 | 4.23e-01 | 100.0% | 63.1% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 45.0 | 4.23e-01 | 100.0% | 69.9% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 48.0 | 4.25e-01 | 100.0% | 62.9% |
| 1mswD01 | 1.10.1320.10 | Mainly Alpha › Orthogonal Bundle › T7 RNA polymerase; domain 1 › DNA-directed RNA polymerase, N-terminal domain | 0.57 | 48.0 | 3.03e-01 | 96.4% | 37.7% |
| 1z6tA04 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 48.0 | 4.28e-01 | 100.0% | 65.9% |
| 4gcvC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 46.0 | 3.57e-01 | 100.0% | 38.3% |
| 2qvoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 4.08e-01 | 100.0% | 63.2% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 46.0 | 4.06e-01 | 100.0% | 66.3% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.43e-01 | 96.4% | 39.5% |
| 3lfkD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.71e-01 | 100.0% | 48.2% |
| 4mo0A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.55 | 44.0 | 4.06e-01 | 100.0% | 67.1% |
| 4b8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.43e-01 | 100.0% | 38.6% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 3.49e-01 | 100.0% | 40.8% |
| 4rs8A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 44.0 | 4.01e-01 | 98.2% | 66.7% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.54 | 44.0 | 3.35e-01 | 100.0% | 35.3% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 45.0 | 4.05e-01 | 100.0% | 76.2% |
| 2e9yB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.54 | 38.0 | 2.48e-01 | 78.6% | 95.5% |
| 2qenA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 43.0 | 4.10e-01 | 96.4% | 78.6% |
| 3pqkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.75e-01 | 100.0% | 56.6% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.80e-01 | 100.0% | 61.3% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.51 | 41.0 | 3.59e-01 | 96.4% | 66.3% |
| 2fnaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 39.0 | 2.72e-01 | 83.9% | 82.3% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 41.0 | 3.69e-01 | 100.0% | 65.6% |
| 2p6rA03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.50 | 40.0 | 2.88e-01 | 100.0% | 30.7% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3286117 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.85 | 69.0 | 5.27e-01 | 100.0% | 40.0% |
| 4950846 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.81 | 66.0 | 6.91e-01 | 100.0% | 100.0% |
| 5032504 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.81 | 65.0 | 6.61e-01 | 100.0% | 90.9% |
| 3838564 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.80 | 64.0 | 6.32e-01 | 98.2% | 83.3% |
| 5000254 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.78 | 63.0 | 6.59e-01 | 98.2% | 100.0% |
| 4682727 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.75 | 59.0 | 5.97e-01 | 100.0% | 90.9% |
| 3952885 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.74 | 60.0 | 6.23e-01 | 98.2% | 100.0% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.74 | 59.0 | 5.33e-01 | 100.0% | 63.7% |
| 3589675 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.73 | 57.0 | 5.93e-01 | 98.2% | 98.0% |
| 5001454 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 54.0 | 5.04e-01 | 100.0% | 80.0% |
| 3808247 | 101.1.2.164 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2 | 0.64 | 44.0 | 4.25e-01 | 92.9% | 63.1% |
| 3652603 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.62 | 50.0 | 4.15e-01 | 100.0% | 48.2% |
| 3816823 | 101.1.2.183 ↗ | alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH | 0.60 | 50.0 | 4.22e-01 | 100.0% | 73.3% |
| 3324960 | 101.1.2.183 ↗ | alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH | 0.60 | 50.0 | 4.15e-01 | 100.0% | 70.9% |
| 4420420 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 50.0 | 4.40e-01 | 100.0% | 62.2% |
| 3287940 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.59 | 51.0 | 4.16e-01 | 100.0% | 71.8% |
| 3173825 | 101.1.2.183 ↗ | alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH | 0.59 | 48.0 | 4.26e-01 | 100.0% | 69.5% |
| 3969385 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 47.0 | 4.26e-01 | 89.3% | 72.5% |
| 4994237 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.59 | 47.0 | 4.10e-01 | 100.0% | 55.8% |
| 3881443 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.59 | 50.0 | 3.21e-01 | 100.0% | 31.0% |
| 4009354 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.59 | 46.0 | 4.02e-01 | 89.3% | 64.4% |
| 4931635 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.58 | 46.0 | 4.14e-01 | 100.0% | 60.7% |
| 4206579 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.58 | 47.0 | 3.97e-01 | 89.3% | 61.1% |
| 3520952 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 4.02e-01 | 92.9% | 65.7% |
| 5003768 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 47.0 | 4.39e-01 | 100.0% | 73.3% |
| 5026584 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.57 | 43.0 | 3.77e-01 | 100.0% | 51.6% |
| 3269517 | 101.1.2.183 ↗ | alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH | 0.57 | 46.0 | 3.94e-01 | 100.0% | 59.0% |
| 5028701 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 44.0 | 4.19e-01 | 96.4% | 71.4% |
| 4927050 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 39.0 | 3.49e-01 | 87.5% | 49.4% |
| 5047881 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 43.0 | 3.98e-01 | 96.4% | 65.0% |
| 5033726 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.55 | 42.0 | 3.60e-01 | 100.0% | 49.0% |
| 5041253 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 44.0 | 3.69e-01 | 100.0% | 49.1% |
| 3284225 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.55 | 45.0 | 4.09e-01 | 96.4% | 75.0% |
| 5037085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 41.0 | 3.70e-01 | 100.0% | 55.6% |
| 5053259 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.55 | 44.0 | 4.14e-01 | 96.4% | 72.0% |
| 3282607 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 43.0 | 3.55e-01 | 100.0% | 43.2% |
| 5036278 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 42.0 | 4.17e-01 | 100.0% | 86.7% |
| 5002953 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.54 | 41.0 | 3.85e-01 | 96.4% | 65.8% |
| 5054005 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 44.0 | 3.92e-01 | 100.0% | 75.6% |
| 5012052 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.53 | 43.0 | 3.42e-01 | 96.4% | 63.1% |
| 5019846 | 101.1.2.728 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF31122 | 0.53 | 41.0 | 3.67e-01 | 98.2% | 55.8% |
| 4963813 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.53 | 42.0 | 3.75e-01 | 96.4% | 60.0% |
| 5078709 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.53 | 44.0 | 3.64e-01 | 100.0% | 71.8% |
| 4602045 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 43.0 | 3.84e-01 | 100.0% | 74.4% |
| 5010717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 41.0 | 3.91e-01 | 98.2% | 74.7% |
| 5002434 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 3.92e-01 | 98.2% | 76.0% |
| 3602631 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.52 | 40.0 | 3.76e-01 | 96.4% | 67.5% |
| 5027864 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.51 | 41.0 | 3.89e-01 | 98.2% | 72.0% |
| 4979216 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 40.0 | 3.57e-01 | 96.4% | 74.4% |