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NC_073481.1__YP_010756090.1__QEJ66_gp08__00008
Bact-VirNC_073481.1__YP_010756090.1__QEJ66_gp08__00008
Identity
- Accession:
- NC_073481 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-190
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18013.7 best | Phage_lysozyme2 | 90.2 | 2.00e-25 | 97.1% | 98.5% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ct5A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.91 | 78.0 | 8.06e-01 | 100.0% | 93.1% |
| 3fi7A01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.71 | 52.0 | 5.85e-01 | 100.0% | 97.7% |
| 1xsfA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.70 | 36.0 | 4.43e-01 | 89.4% | 77.8% |
| 1iizA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.69 | 48.0 | 5.57e-01 | 99.4% | 99.2% |
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.68 | 50.0 | 5.61e-01 | 98.8% | 97.0% |
| 1hfxA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 47.0 | 5.42e-01 | 99.4% | 99.2% |
| 4yibA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.66 | 54.0 | 5.61e-01 | 97.1% | 91.8% |
| 4yf2A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.65 | 48.0 | 5.38e-01 | 99.4% | 98.5% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.64 | 52.0 | 5.48e-01 | 98.8% | 94.8% |
| 6cfcA01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.63 | 53.0 | 5.48e-01 | 94.7% | 92.5% |
| 1qsaA03 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.63 | 55.0 | 5.52e-01 | 100.0% | 90.8% |
| 1k87A02 | 1.10.2060.10 | Mainly Alpha › Orthogonal Bundle › PutA proline dehydrogenase (PRODH), domain 2 › PutA proline dehydrogenase (PRODH), domain 2 | 0.63 | 29.0 | 3.50e-01 | 99.4% | 64.2% |
| 1am7A00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.62 | 53.0 | 5.57e-01 | 91.2% | 98.1% |
| 3bkhA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 55.0 | 5.40e-01 | 97.1% | 97.8% |
| 2xqoA00 | 1.10.530.60 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 55.0 | 5.11e-01 | 99.4% | 80.0% |
| 7k5cB01 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.60 | 45.0 | 4.69e-01 | 91.2% | 83.6% |
| 4hjzA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.59 | 53.0 | 5.23e-01 | 97.6% | 94.5% |
| 4c5fA02 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.59 | 52.0 | 5.31e-01 | 95.9% | 100.0% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1253692 | 235.1.1.23 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 | 0.91 | 78.0 | 8.01e-01 | 100.0% | 91.4% |
| 3279121 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.80 | 44.0 | 5.95e-01 | 88.8% | 98.9% |
| 3289790 | 235.1.1.23 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 | 0.79 | 68.0 | 7.19e-01 | 98.8% | 98.7% |
| 3254511 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.76 | 46.0 | 5.77e-01 | 97.1% | 98.1% |
| 3284481 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.73 | 58.0 | 6.32e-01 | 100.0% | 99.3% |
| 185214 | 235.1.1.14 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas | 0.73 | 36.0 | 4.93e-01 | 88.2% | 92.0% |
| 3587750 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.72 | 45.0 | 5.55e-01 | 88.2% | 100.0% |
| 3838879 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.70 | 58.0 | 6.13e-01 | 100.0% | 98.0% |
| 3396023 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.67 | 46.0 | 5.40e-01 | 98.8% | 100.0% |
| 83283 | 235.1.1.1 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys | 0.66 | 46.0 | 5.31e-01 | 100.0% | 97.6% |
| 3317412 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.64 | 55.0 | 5.19e-01 | 100.0% | 77.5% |
| 3824608 | 235.1.1.2 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_19 | 0.64 | 59.0 | 4.95e-01 | 100.0% | 77.5% |
| 4009649 | 632.3.1.13 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 | 0.63 | 51.0 | 5.24e-01 | 99.4% | 89.9% |
| 3944103 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.63 | 58.0 | 5.68e-01 | 100.0% | 92.2% |
| 3979308 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.62 | 57.0 | 5.69e-01 | 98.2% | 97.1% |
| 1175858 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.60 | 55.0 | 5.32e-01 | 97.1% | 94.2% |
| 4530587 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.58 | 52.0 | 5.10e-01 | 96.5% | 94.6% |
| 3978932 | 235.1.1.35 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › DUF1615 | 0.56 | 51.0 | 4.89e-01 | 99.4% | 94.4% |
| 3961318 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.51 | 30.0 | 3.32e-01 | 91.2% | 71.5% |
D2
high
residues 209-330
Domain cluster:
rep: ON453900.1__WAK79514.1__X__00090__D16-136
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 62.8 | 4.90e-17 | 70.5% | 93.8% |
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k3aA01 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.83 | 65.0 | 7.17e-01 | 86.1% | 98.0% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.81 | 76.0 | 6.12e-01 | 99.2% | 75.2% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.80 | 67.0 | 5.48e-01 | 88.5% | 63.4% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.74 | 70.0 | 6.25e-01 | 100.0% | 85.4% |
| 4xcmA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.69 | 59.0 | 5.97e-01 | 99.2% | 90.2% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 33.0 | 4.17e-01 | 95.9% | 88.0% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.58 | 32.0 | 4.18e-01 | 76.2% | 97.1% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 35.0 | 4.17e-01 | 91.8% | 92.5% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 34.0 | 4.26e-01 | 77.9% | 98.6% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 3.88e-01 | 91.0% | 76.0% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 34.0 | 3.70e-01 | 92.6% | 77.0% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.51 | 46.0 | 4.05e-01 | 100.0% | 73.5% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4034057 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.88 | 73.0 | 7.88e-01 | 94.3% | 100.0% |
| 184711 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.84 | 70.0 | 6.33e-01 | 95.9% | 67.7% |
| 4031159 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.83 | 76.0 | 6.92e-01 | 100.0% | 76.0% |
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.78 | 74.0 | 6.81e-01 | 99.2% | 88.0% |
| 3744277 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.72 | 31.0 | 4.81e-01 | 70.5% | 100.0% |
| 2141406 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.71 | 66.0 | 6.39e-01 | 99.2% | 90.4% |
| 3291157 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.70 | 64.0 | 6.09e-01 | 99.2% | 90.0% |
| 3784140 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 33.0 | 4.75e-01 | 77.0% | 100.0% |
| 4999430 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 41.0 | 4.22e-01 | 85.2% | 65.8% |
| 4943011 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.64 | 43.0 | 4.78e-01 | 93.4% | 87.4% |
| 3879132 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.62 | 34.0 | 4.36e-01 | 76.2% | 89.3% |
| 3629830 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 39.0 | 4.52e-01 | 92.6% | 89.4% |
| 3628131 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 42.0 | 4.55e-01 | 98.4% | 84.0% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 37.0 | 4.36e-01 | 90.2% | 88.2% |
| 153172 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 36.0 | 4.17e-01 | 91.0% | 81.1% |
| 3911238 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 38.0 | 4.45e-01 | 90.2% | 91.8% |
| 3407827 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 36.0 | 4.18e-01 | 92.6% | 87.1% |
| 3883165 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 40.0 | 4.37e-01 | 100.0% | 85.0% |
| 4055256 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 37.0 | 4.22e-01 | 92.6% | 86.7% |
| 3508441 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 38.0 | 4.23e-01 | 92.6% | 84.2% |
| 3407820 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 36.0 | 4.20e-01 | 90.2% | 88.2% |
| 3535298 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 38.0 | 4.35e-01 | 92.6% | 90.0% |
| 157323 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 32.0 | 4.18e-01 | 76.2% | 97.1% |
| 3547102 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 36.0 | 4.22e-01 | 90.2% | 90.6% |
| 3393358 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 38.0 | 4.26e-01 | 93.4% | 87.4% |
| 3514906 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 38.0 | 3.30e-01 | 98.4% | 43.2% |
| 3171604 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.57 | 33.0 | 4.20e-01 | 79.5% | 96.0% |
| 3877938 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 37.0 | 4.18e-01 | 93.4% | 90.0% |
| 3883161 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.57 | 36.0 | 4.13e-01 | 92.6% | 87.8% |
| 3547093 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 36.0 | 4.20e-01 | 89.3% | 88.9% |
| 322770 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 36.0 | 3.88e-01 | 91.0% | 76.0% |
| 3877478 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 36.0 | 3.92e-01 | 100.0% | 79.0% |
| 3407853 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 36.0 | 4.06e-01 | 97.5% | 87.8% |
| 3609031 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 4.17e-01 | 70.5% | 96.0% |
| 3245045 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.55 | 44.0 | 3.73e-01 | 100.0% | 51.5% |
| 3313139 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.52 | 44.0 | 3.89e-01 | 90.2% | 80.6% |
| 3768095 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 37.0 | 4.09e-01 | 79.5% | 92.6% |
| 3290564 | 4.1.1.292 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Rv2311 | 0.52 | 36.0 | 4.20e-01 | 75.4% | 97.8% |