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NC_073482.1__YP_010756109.1__QEJ67_gp07__00007

Bact-Vir

NC_073482.1__YP_010756109.1__QEJ67_gp07__00007

Identity

Accession:
NC_073482 ↗
Kingdom:
phage

Quality

85.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_CI55P1

TaxID: 2968677

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-148
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3rd4B00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 43.0 5.05e-01 73.1% 93.9%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 39.0 3.94e-01 74.8% 72.6%
1bvsA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 31.0 3.83e-01 74.8% 100.0%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 37.0 3.64e-01 70.6% 82.4%
1b7eA01 3.90.350.10 Alpha Beta › Alpha-Beta Complex › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 › Transposase Inhibitor Protein From Tn5; Chain A, domain 1 0.51 36.0 2.85e-01 90.8% 35.4%
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.51 30.0 3.41e-01 81.5% 77.5%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3573692 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 70.0 7.02e-01 100.0% 98.3%
4995179 236.3.1.1 ↗ beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 0.68 39.0 4.52e-01 73.1% 78.8%
3317450 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 47.0 4.93e-01 85.7% 82.7%
5029482 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 36.0 4.28e-01 77.3% 85.0%
3802227 2484.1.1.197 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 0.58 46.0 2.77e-01 85.7% 24.0%
3932593 2.1.1.179 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REV3_N 0.57 41.0 4.30e-01 73.1% 100.0%
None — 0.57 43.0 2.58e-01 79.8% 24.2%
3640971 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 3.88e-01 79.0% 61.3%
4448420 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 43.0 3.47e-01 83.2% 82.1%
3997614 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 46.0 4.60e-01 100.0% 90.0%
4018741 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 37.0 3.18e-01 74.8% 85.5%
3800763 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.52 47.0 3.59e-01 100.0% 79.6%
3222389 210.1.1.1 ↗ a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome 0.52 40.0 3.24e-01 82.4% 61.3%
3923688 5.1.4.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 0.51 45.0 3.12e-01 98.3% 42.6%
3936609 5.1.3.176 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.51 41.0 2.83e-01 87.4% 45.4%
5076310 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.50 34.0 3.14e-01 77.3% 54.2%