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NC_073485.1__YP_010756275.1__QEN62_gp39__00039
Bact-VirNC_073485.1__YP_010756275.1__QEN62_gp39__00039
Identity
- Accession:
- NC_073485 ↗
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Taxonomy
TaxID: 2926084
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-105
Domain cluster:
rep: MH853786.1__AYP68882.1__X__00033__D17-112
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 35.0 | 4.48e-01 | 74.8% | 100.0% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 41.0 | 4.73e-01 | 100.0% | 100.0% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 30.0 | 3.80e-01 | 72.8% | 100.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.58 | 40.0 | 4.52e-01 | 72.8% | 97.4% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.53 | 46.0 | 4.12e-01 | 96.1% | 88.3% |
| 4ft4B01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.52 | 46.0 | 4.09e-01 | 99.0% | 96.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 35.0 | 4.25e-01 | 92.2% | 83.1% |
| 4953223 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.64 | 33.0 | 4.34e-01 | 90.3% | 100.0% |
| 3518475 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 40.0 | 4.67e-01 | 83.5% | 92.9% |
| 4985100 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 32.0 | 4.15e-01 | 89.3% | 98.0% |
| 4957377 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.60 | 33.0 | 3.95e-01 | 92.2% | 85.7% |
| 3638086 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 44.0 | 3.73e-01 | 79.6% | 95.0% |
| 4139090 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.59 | 33.0 | 4.05e-01 | 91.3% | 100.0% |
| 4024913 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 34.0 | 4.11e-01 | 80.6% | 93.8% |
| 5029405 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.56 | 32.0 | 3.87e-01 | 90.3% | 98.2% |
| 4044269 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.55 | 32.0 | 3.67e-01 | 72.8% | 81.4% |
| 3855972 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.54 | 33.0 | 3.99e-01 | 85.4% | 96.9% |
| 3579728 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.51 | 33.0 | 3.79e-01 | 87.4% | 97.1% |
| 3793656 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.51 | 39.0 | 3.50e-01 | 82.5% | 82.1% |
| 3214694 | 4.1.1.331 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4708 | 0.50 | 36.0 | 3.58e-01 | 73.8% | 94.3% |
D2
medium
residues 125-188
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n7lA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 40.0 | 2.98e-01 | 85.9% | 62.2% |
| 4b0eD00 | 3.10.20.410 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › PapC, N-terminal domain | 0.52 | 40.0 | 3.63e-01 | 90.6% | 82.0% |
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.51 | 35.0 | 2.59e-01 | 75.0% | 45.8% |