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NC_073604.1__YP_010762271.1__QE323_gp031__00146
Bact-VirNC_073604.1__YP_010762271.1__QE323_gp031__00146
Identity
- Accession:
- NC_073604 ↗
- Kingdom:
- phage
Quality
88.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Vandenendeviridae›
Pakpunavirus›
Pseudomonas_phage_SPA05
TaxID: 3003720
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-93
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF23793.2 best | LysC | 28.8 | 1.30e-06 | 89.3% | 73.5% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.80 | 69.0 | 5.44e-01 | 96.4% | 60.3% |
| 4nsmA00 | 6.10.250.2770 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.78 | 68.0 | 6.31e-01 | 98.2% | 78.9% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 62.0 | 4.96e-01 | 98.2% | 68.9% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.70 | 57.0 | 4.48e-01 | 87.5% | 54.0% |
| 5t5qB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 50.0 | 3.38e-01 | 98.2% | 70.6% |
| 3ayvD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.59 | 44.0 | 2.85e-01 | 78.6% | 33.6% |
| 1vmeB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 41.0 | 2.70e-01 | 80.4% | 70.5% |