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NC_073674.1__YP_010765835.1__QGM57_gp09__00009

Bact-Vir

NC_073674.1__YP_010765835.1__QGM57_gp09__00009

Identity

Accession:
NC_073674 ↗
Kingdom:
phage

Quality

83.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hollowayvirus› Pseudomonas_phage_phiC725A

TaxID: 1921524

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-59
PDB
Domain cluster: representative
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.87 75.0 5.76e-01 100.0% 44.2%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.86 75.0 6.52e-01 100.0% 64.4%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 77.0 7.32e-01 100.0% 89.5%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 72.0 6.91e-01 100.0% 83.9%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 74.0 7.25e-01 100.0% 94.3%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.81 72.0 6.13e-01 100.0% 62.3%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 71.0 6.49e-01 100.0% 92.2%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 63.0 6.25e-01 100.0% 84.9%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.78 70.0 6.46e-01 100.0% 90.3%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 66.0 5.23e-01 100.0% 47.0%
3pmiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 6.18e-01 98.0% 73.8%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.76 67.0 6.39e-01 100.0% 98.3%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 66.0 6.13e-01 100.0% 93.4%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.74 66.0 6.24e-01 100.0% 84.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.96e-01 100.0% 79.0%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 64.0 5.32e-01 100.0% 57.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 6.02e-01 100.0% 97.9%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 5.27e-01 100.0% 78.7%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 57.0 5.21e-01 100.0% 81.7%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 58.0 5.35e-01 100.0% 83.8%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.40e-01 100.0% 98.3%
1m5q101 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.20e-01 100.0% 79.4%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 4.93e-01 100.0% 70.7%
4c92B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 4.56e-01 100.0% 57.1%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 5.08e-01 100.0% 74.6%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.24e-01 100.0% 86.2%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 55.0 4.99e-01 100.0% 79.5%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 55.0 4.89e-01 100.0% 79.5%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 56.0 4.97e-01 100.0% 78.7%
3jb9H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 4.85e-01 100.0% 80.3%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 4.95e-01 100.0% 78.9%
4c92F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 4.77e-01 100.0% 80.5%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 4.76e-01 100.0% 82.3%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.57e-01 95.9% 62.7%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.80e-01 100.0% 71.6%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 4.53e-01 100.0% 84.0%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 45.0 3.24e-01 85.7% 30.7%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 3.42e-01 87.8% 33.6%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.58 48.0 3.69e-01 100.0% 67.7%
3fqmA01 2.20.25.210 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B 0.57 45.0 4.31e-01 100.0% 75.4%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 39.0 3.15e-01 87.8% 37.6%
7chiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 42.0 2.78e-01 87.8% 56.5%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.52 42.0 3.86e-01 100.0% 74.6%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.51 42.0 2.97e-01 95.9% 32.4%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.50 37.0 3.25e-01 83.7% 79.8%
ECOD (78)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3650296 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.91 84.0 6.58e-01 100.0% 68.4%
3304602 4.1.1.427 ↗ beta barrels › SH3 › SH3 › SH3 › F-box 0.91 76.0 5.97e-01 100.0% 46.3%
3241793 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.91 79.0 5.98e-01 100.0% 43.8%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.90 76.0 4.83e-01 100.0% 21.4%
3231177 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.89 73.0 7.32e-01 98.0% 88.0%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.88 73.0 7.02e-01 98.0% 80.0%
3198731 4.1.1.249 ↗ beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.87 79.0 5.65e-01 100.0% 36.9%
3830352 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.87 78.0 6.45e-01 100.0% 77.6%
4121981 4.1.1.325 ↗ beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.86 78.0 5.62e-01 100.0% 38.4%
3821920 4.1.1.283 ↗ beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.86 78.0 7.49e-01 100.0% 87.3%
3482225 4.1.1.300 ↗ beta barrels › SH3 › SH3 › SH3 › KN17_SH3, SH3_KIN17_C 0.84 76.0 5.47e-01 100.0% 39.2%
3304627 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.84 73.0 7.07e-01 100.0% 85.5%
3830083 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.83 75.0 5.36e-01 100.0% 36.3%
3404812 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.83 76.0 5.46e-01 100.0% 37.7%
3514345 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.82 73.0 6.68e-01 100.0% 95.4%
3482359 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 73.0 5.54e-01 100.0% 74.5%
3482202 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.80 65.0 6.24e-01 100.0% 78.2%
3176049 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.80 72.0 6.40e-01 100.0% 72.5%
4808338 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.80 72.0 4.98e-01 100.0% 31.6%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 73.0 6.60e-01 100.0% 87.5%
3784140 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 72.0 6.97e-01 100.0% 92.7%
3926207 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 71.0 6.99e-01 100.0% 94.3%
3566631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 72.0 6.03e-01 100.0% 73.8%
3482680 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.50e-01 100.0% 90.8%
None — 0.79 71.0 4.12e-01 100.0% 18.0%
3217772 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 5.91e-01 100.0% 84.7%
4028731 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 72.0 6.51e-01 100.0% 86.2%
3816455 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.79 70.0 5.16e-01 100.0% 57.6%
1068760 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.79 63.0 5.50e-01 100.0% 57.7%
3482646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 70.0 4.60e-01 100.0% 29.5%
3672445 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 69.0 4.90e-01 100.0% 48.3%
4218488 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 70.0 5.93e-01 100.0% 73.8%
3928050 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 70.0 5.03e-01 100.0% 36.3%
3479042 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.20e-01 100.0% 84.3%
3300226 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.78 69.0 5.86e-01 100.0% 90.0%
3376597 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 61.0 6.33e-01 85.7% 100.0%
2521867 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 70.0 5.50e-01 100.0% 57.1%
3787441 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 69.0 5.62e-01 100.0% 65.6%
3710561 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 69.0 6.28e-01 100.0% 93.8%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.77 63.0 4.34e-01 89.8% 30.6%
3725153 4.1.1.286 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7072 0.77 68.0 5.78e-01 100.0% 62.5%
4266110 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.76 65.0 5.78e-01 100.0% 67.1%
3313403 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 53.0 5.11e-01 75.5% 70.9%
3471771 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 66.0 6.35e-01 100.0% 87.3%
3480200 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.74 65.0 5.63e-01 100.0% 97.3%
3225974 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 56.0 4.65e-01 85.7% 93.3%
4134531 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 65.0 5.65e-01 100.0% 66.2%
3317821 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 61.0 5.34e-01 95.9% 86.7%
3964422 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.72 63.0 4.41e-01 100.0% 30.6%
3480656 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.72 61.0 4.76e-01 100.0% 65.2%
3167351 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.71 60.0 5.06e-01 100.0% 64.8%
4485354 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.70 58.0 4.88e-01 100.0% 61.7%
4987003 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.70 58.0 5.41e-01 100.0% 84.6%
4016022 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.20e-01 100.0% 76.0%
4983255 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.70 57.0 5.15e-01 100.0% 76.0%
3621457 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 58.0 5.28e-01 100.0% 82.9%
4990775 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 57.0 5.09e-01 100.0% 72.0%
1120986 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 58.0 5.36e-01 100.0% 83.6%
2325340 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 57.0 4.66e-01 100.0% 54.0%
4948069 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 56.0 5.01e-01 100.0% 77.3%
1549365 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 56.0 4.85e-01 100.0% 72.3%
409204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 56.0 4.57e-01 100.0% 57.3%
3701868 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.67 56.0 4.72e-01 100.0% 73.3%
4013487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 4.42e-01 100.0% 68.2%
3927391 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.67 55.0 4.52e-01 100.0% 64.1%
3168781 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.67 55.0 4.46e-01 100.0% 66.7%
3486357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 4.83e-01 100.0% 82.5%
5000810 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.67 56.0 4.79e-01 100.0% 68.2%
3810217 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.30e-01 100.0% 90.0%
5036497 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 53.0 4.74e-01 100.0% 72.5%
4932541 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 54.0 4.89e-01 100.0% 78.1%
4028659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.85e-01 100.0% 77.5%
4974641 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.65 53.0 4.85e-01 100.0% 81.4%
3291271 331.3.1.9 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.64 53.0 3.84e-01 93.9% 66.2%
5010198 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.58 51.0 3.80e-01 100.0% 84.0%
3970503 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 44.0 3.37e-01 91.8% 45.0%
3711546 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 45.0 3.13e-01 100.0% 82.6%
3698253 5.1.4.36 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N 0.53 42.0 2.47e-01 93.9% 29.5%
D2 high residues 338-471
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lewA01 1.25.40.390 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 43.0 3.27e-01 79.1% 95.7%
2yx8A00 1.10.150.510 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family 0.56 33.0 4.10e-01 72.4% 96.3%
4z7fB00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.54 40.0 3.76e-01 96.3% 61.3%
1auwA02 1.20.200.10 Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) 0.54 42.0 3.58e-01 84.3% 66.7%
4j5tA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.54 44.0 3.02e-01 88.8% 55.4%
2innE01 3.10.20.560 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phenol hydroxylase 0.53 25.0 2.85e-01 75.4% 53.8%
3vkgB03 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.52 36.0 3.44e-01 78.4% 60.3%
1azsA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.51 38.0 3.36e-01 76.1% 71.6%
5e3xA00 1.10.1370.30 Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › 0.51 37.0 2.52e-01 74.6% 20.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3389084 3937.1.1.2 ↗ alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.64 51.0 3.84e-01 84.3% 87.6%
3256154 192.4.1.18 ↗ alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › PF26116 0.61 36.0 3.49e-01 74.6% 51.6%
3217417 5001.1.1.121 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › TRAM_LAG1_CLN8 0.59 46.0 3.40e-01 81.3% 52.1%
5046133 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.58 39.0 4.52e-01 83.6% 100.0%
3230889 5082.1.1.0 ↗ alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like 0.57 41.0 3.62e-01 74.6% 83.6%
4590121 3754.1.1.2 ↗ alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4,MraY_sig1 0.56 43.0 3.13e-01 82.8% 70.6%
3751029 3720.1.1.1 ↗ alpha bundles › Receptor activity-modifying protein (RAMP) › Receptor activity-modifying protein (RAMP) › Receptor activity-modifying protein (RAMP) › RAMP 0.55 32.0 3.88e-01 73.1% 86.7%
4011414 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.55 44.0 3.79e-01 85.8% 77.2%
1068648 3720.1.1.1 ↗ alpha bundles › Receptor activity-modifying protein (RAMP) › Receptor activity-modifying protein (RAMP) › Receptor activity-modifying protein (RAMP) › RAMP 0.54 32.0 3.86e-01 73.1% 87.9%
4022084 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.54 41.0 3.37e-01 85.8% 43.2%
3924910 633.21.1.0 ↗ alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.52 42.0 3.99e-01 87.3% 85.5%
3787279 633.23.1.9 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 0.52 42.0 3.32e-01 86.6% 87.9%
3363306 611.7.1.16 ↗ alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › PUB2_N 0.51 39.0 3.76e-01 79.1% 96.0%
4029180 4984.1.1.0 ↗ alpha bundles › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain › Duffy-binding-like domain, C-terminal subdomain 0.50 39.0 3.73e-01 82.8% 100.0%
4962836 5001.1.1.292 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM 0.50 38.0 3.16e-01 79.9% 75.5%
5018488 304.25.1.1 ↗ a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.50 36.0 2.96e-01 73.9% 78.7%
D3 medium residues 89-127_146-197_231-252_308-328
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oq2D00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 66.0 5.33e-01 96.3% 85.0%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4499405 2005.1.1.11 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 0.63 57.0 4.68e-01 98.5% 79.6%