←Back to structures

NC_074561.1__YP_010771375.1__QIM33_gp05__00005

Bact-Vir

NC_074561.1__YP_010771375.1__QIM33_gp05__00005

Identity

Accession:
NC_074561 ↗
Kingdom:
phage

Quality

90.5 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Tectiliviricetes› Kalamavirales› Tectiviridae› Betatectivirus› Bacillus_phage_Sole

TaxID: 1260287

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-196
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2py5A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.79 75.0 7.59e-01 100.0% 99.5%
4fzxC00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.66 56.0 5.94e-01 98.9% 98.8%
2qxfA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.63 57.0 5.69e-01 94.6% 99.0%
1on4A00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.58 37.0 3.79e-01 91.8% 65.5%
4g65A03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 30.0 3.45e-01 93.5% 67.2%
3fi9A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 32.0 3.59e-01 97.3% 72.7%
1up7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 31.0 3.57e-01 92.4% 79.6%
1hyhA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 31.0 3.42e-01 95.1% 75.2%
1zcjA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 31.0 3.10e-01 93.5% 58.2%
3l77A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 37.0 3.46e-01 100.0% 60.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4428763 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.83 79.0 7.13e-01 100.0% 96.7%
4147965 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.81 79.0 6.94e-01 100.0% 88.0%
4486407 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.81 78.0 7.69e-01 100.0% 100.0%
5081301 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.79 74.0 5.64e-01 98.9% 67.4%
3506686 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.78 75.0 7.01e-01 100.0% 88.6%
5068292 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.74 65.0 6.39e-01 98.4% 86.2%
3982042 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.73 47.0 5.57e-01 100.0% 92.3%
5056095 2484.1.1.68 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 0.72 64.0 6.21e-01 95.7% 85.4%
4219785 2484.1.1.144 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDD_Tnp_IS110 0.71 46.0 5.56e-01 98.9% 98.3%
3591717 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.71 64.0 6.19e-01 100.0% 86.5%
3759576 2484.1.1.288 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PML_C 0.70 58.0 5.13e-01 100.0% 62.4%
3569539 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.70 58.0 5.95e-01 100.0% 88.9%
4025342 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.68 65.0 5.84e-01 100.0% 81.2%
3778350 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.68 62.0 5.42e-01 96.2% 67.3%
3715980 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.67 64.0 5.64e-01 100.0% 84.3%
3193711 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 62.0 5.68e-01 100.0% 80.4%
3502270 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.66 57.0 5.96e-01 100.0% 97.1%
4290521 2484.1.1.91 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Exu_RNase_H_like 0.64 61.0 5.30e-01 100.0% 90.6%
3893443 2484.1.1.13 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T 0.63 60.0 5.58e-01 100.0% 83.2%
3742269 2484.1.1.90 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDDh_C 0.62 56.0 5.49e-01 95.7% 86.5%
3165471 2003.1.1.28 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.58 30.0 3.40e-01 93.5% 64.3%
5070158 2484.1.1.34 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.57 45.0 3.66e-01 100.0% 44.4%
5052762 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 27.0 3.69e-01 91.8% 91.8%
3241646 247.1.1.0 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase 0.54 43.0 3.50e-01 83.7% 90.7%
5018729 302.4.1.0 ↗ a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit 0.53 27.0 3.51e-01 97.3% 82.7%
3198247 2003.1.1.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short 0.50 37.0 3.03e-01 76.6% 98.1%
D2 high residues 226-371_456-497
PDB
Domain cluster: rep: DNA_polymerase__YP_002213831__Human_mastadenovirus_B__108098__D647-666_688-846_965-977
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03175.19 best DNA_pol_B_2 72.0 6.60e-20 91.5% 31.0%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fsdA02 3.40.5.100 Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › 0.52 26.0 3.53e-01 76.1% 98.8%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4365778 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.93 82.0 6.94e-01 99.5% 60.7%
4264107 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.92 85.0 7.02e-01 99.5% 59.7%
3663219 4968.1.1.1 ↗ a+b complex topology › insertion domain in bacteriophage phi29 DNA polymerase › insertion domain in bacteriophage phi29 DNA polymerase › insertion domain in bacteriophage phi29 DNA polymerase › DNA_pol_B_2 0.88 49.0 6.71e-01 76.6% 100.0%
4674811 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.88 85.0 6.79e-01 99.5% 62.2%
4601946 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.87 76.0 6.42e-01 98.9% 59.3%
3680878 304.48.1.17 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B_2 0.85 83.0 6.68e-01 99.5% 65.6%
4651639 2484.1.1.36 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 0.83 80.0 6.21e-01 99.5% 63.3%
4461958 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.58 47.0 4.25e-01 98.9% 65.4%
4935885 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.55 52.0 4.21e-01 100.0% 68.7%
4981193 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.53 45.0 3.98e-01 96.8% 64.3%
4956224 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.53 47.0 4.34e-01 98.9% 74.0%
5025209 304.48.1.3 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B 0.52 44.0 4.07e-01 98.4% 70.6%
4970593 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.51 44.0 3.98e-01 94.7% 67.6%
None — 0.51 48.0 3.06e-01 100.0% 32.1%
D3 medium residues 410-451
PDB
Domain cluster: representative
CATH (81)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.76 65.0 4.13e-01 100.0% 28.8%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.71 61.0 4.48e-01 97.6% 39.6%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.71 59.0 4.95e-01 97.6% 68.0%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 58.0 4.27e-01 100.0% 53.1%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 56.0 4.55e-01 100.0% 56.5%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.68 54.0 3.98e-01 100.0% 45.3%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.67 55.0 3.78e-01 100.0% 29.5%
2raaA00 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.66 52.0 3.59e-01 100.0% 32.0%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.65 52.0 3.50e-01 92.9% 30.9%
2abyA00 3.30.70.1980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein PF09406, DUF2004 0.65 51.0 3.90e-01 100.0% 55.7%
3e23A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.65 53.0 3.55e-01 100.0% 34.8%
4ozjA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 53.0 4.13e-01 100.0% 56.7%
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 53.0 4.29e-01 100.0% 54.4%
1kzfA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.64 52.0 3.47e-01 100.0% 21.2%
3o4oB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 51.0 3.95e-01 100.0% 56.0%
3u83A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 52.0 4.11e-01 100.0% 58.4%
6y1zA01 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.63 53.0 3.46e-01 100.0% 32.5%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.63 50.0 4.28e-01 100.0% 68.3%
3fi7A02 4.10.80.30 Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6 0.63 28.0 3.12e-01 100.0% 55.6%
4nohA01 3.30.70.3060 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 50.0 4.40e-01 100.0% 67.6%
4bbyA05 3.30.300.330 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.62 49.0 3.87e-01 100.0% 58.3%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.62 51.0 4.42e-01 100.0% 77.0%
3g2fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 50.0 4.14e-01 100.0% 62.1%
4r6uA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 50.0 3.94e-01 100.0% 48.5%
1khmA00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.61 49.0 4.07e-01 100.0% 60.7%
1m0sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 49.0 4.33e-01 100.0% 68.1%
3sm3A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 51.0 3.33e-01 100.0% 42.9%
3q87B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 47.0 3.35e-01 97.6% 51.2%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 49.0 3.85e-01 100.0% 48.1%
3tf8B00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.61 50.0 3.38e-01 100.0% 30.4%
4i6yA02 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.61 49.0 3.82e-01 100.0% 64.5%
3efaA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.61 49.0 3.47e-01 100.0% 27.4%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.61 49.0 4.09e-01 100.0% 59.3%
2cy2A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 48.0 3.33e-01 100.0% 26.4%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.60 49.0 4.00e-01 97.6% 59.8%
4bfeA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 4.09e-01 100.0% 86.4%
4atnA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 47.0 3.27e-01 97.6% 33.5%
2g0bH01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.60 49.0 3.36e-01 100.0% 25.0%
2c5dC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 47.0 3.76e-01 100.0% 54.8%
6ztgA01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.60 48.0 4.12e-01 97.6% 81.3%
3ocjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 47.0 2.94e-01 100.0% 28.3%
3cwfA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.59 46.0 3.62e-01 95.2% 60.2%
3blnA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 46.0 3.43e-01 100.0% 31.7%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 51.0 4.01e-01 100.0% 60.9%
2jdcA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 48.0 3.45e-01 100.0% 28.3%
1rf6A01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.59 47.0 3.12e-01 100.0% 22.6%
3cvgA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.59 45.0 3.33e-01 100.0% 31.7%
1xebA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 44.0 3.21e-01 100.0% 26.2%
1vi7A02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 45.0 4.06e-01 100.0% 62.0%
3v69B00 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.58 47.0 3.63e-01 100.0% 49.1%
1cjwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 48.0 3.28e-01 97.6% 45.2%
3gwmA00 3.90.470.20 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain 0.58 44.0 3.37e-01 100.0% 100.0%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 44.0 3.13e-01 100.0% 27.3%
2n8lA00 3.30.310.210 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.57 45.0 3.06e-01 100.0% 28.8%
2gx8A02 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 49.0 3.78e-01 100.0% 59.6%
2pziB02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 46.0 3.29e-01 97.6% 40.7%
2r3sA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 2.81e-01 95.2% 34.9%
3pqvC01 3.65.10.20 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › RNA 3'-terminal phosphate cyclase domain 0.56 42.0 2.81e-01 100.0% 21.6%
1we8A01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.56 45.0 3.80e-01 100.0% 67.9%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 44.0 3.38e-01 100.0% 57.5%
2jvzA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 45.0 3.81e-01 100.0% 76.2%
1fpqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.26e-01 100.0% 57.4%
2jzxA02 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.55 43.0 3.72e-01 100.0% 69.6%
1omsA00 3.30.70.1050 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain 0.55 44.0 3.42e-01 100.0% 90.4%
1tulA00 2.70.40.20 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Baculovirus telokin-like protein 20 0.55 43.0 3.44e-01 100.0% 52.0%
1iybA00 3.90.730.10 Alpha Beta › Alpha-Beta Complex › Ribonuclease Rh; Chain A › Ribonuclease T2-like 0.55 42.0 2.89e-01 100.0% 85.6%
2wyhA05 2.60.40.2210 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 42.0 3.17e-01 97.6% 67.9%
3tqeA02 3.30.70.250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding 0.54 42.0 3.75e-01 100.0% 63.0%
3r0aA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.31e-01 100.0% 50.8%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 40.0 2.94e-01 95.2% 30.1%
2pjdA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 41.0 3.00e-01 100.0% 26.9%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 37.0 3.40e-01 83.3% 51.4%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 3.42e-01 100.0% 66.0%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.54 41.0 3.58e-01 100.0% 63.4%
2bj0A00 2.70.170.10 Mainly Beta › Distorted Sandwich › Acetylcholine Binding Protein; Chain: A, › Neurotransmitter-gated ion-channel ligand-binding domain 0.54 41.0 2.83e-01 100.0% 40.9%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.22e-01 95.2% 71.3%
2zzeA04 3.30.980.10 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 0.53 40.0 3.35e-01 97.6% 94.7%
5wt3A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 38.0 2.76e-01 95.2% 42.5%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.22e-01 97.6% 67.0%
1j27A00 3.30.70.1120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TT1725-like 0.52 39.0 3.28e-01 100.0% 65.3%
1vdhA01 3.30.70.1030 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 0.52 39.0 3.11e-01 100.0% 57.0%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3196489 328.7.1.1 ↗ a+b two layers › IF3-like › Smr domain › Smr domain › Smr 0.81 68.0 5.06e-01 97.6% 52.7%
5000388 304.44.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.80 68.0 5.37e-01 100.0% 63.3%
4972691 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.78 67.0 5.12e-01 100.0% 47.0%
5015712 2003.1.5.54 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.78 65.0 3.99e-01 97.6% 18.9%
5066425 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.76 66.0 5.40e-01 100.0% 61.3%
3492934 312.1.1.19 ↗ a+b three layers › HIT-like › HIT-related › HIT-related › PF26216 0.75 64.0 4.33e-01 97.6% 71.6%
4403450 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.75 63.0 4.63e-01 100.0% 54.2%
4994470 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.75 62.0 5.27e-01 100.0% 61.3%
4062392 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.74 62.0 4.80e-01 100.0% 46.0%
3599895 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.74 61.0 3.80e-01 97.6% 21.0%
5022418 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.74 61.0 5.45e-01 100.0% 75.4%
3602142 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 61.0 4.65e-01 97.6% 50.5%
3477897 304.44.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.73 61.0 4.90e-01 100.0% 62.2%
4992480 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 61.0 4.91e-01 100.0% 54.4%
3602264 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 61.0 4.96e-01 100.0% 57.6%
4931923 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.73 60.0 5.00e-01 97.6% 56.2%
2849954 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.73 63.0 5.21e-01 100.0% 60.5%
3642333 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 60.0 3.97e-01 95.2% 26.9%
3602910 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.72 60.0 4.82e-01 100.0% 55.6%
5033448 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.72 60.0 4.82e-01 100.0% 51.1%
5013331 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.72 58.0 5.13e-01 95.2% 83.1%
4223968 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.72 60.0 4.99e-01 100.0% 57.5%
5015050 2003.1.5.82 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.72 58.0 3.70e-01 100.0% 20.6%
4319533 305.1.1.1 ↗ a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L 0.71 58.0 4.19e-01 100.0% 49.3%
4982133 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.71 60.0 4.97e-01 100.0% 57.5%
4045503 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.71 59.0 5.00e-01 100.0% 61.3%
4934172 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 57.0 5.01e-01 97.6% 68.6%
4007701 1075.1.2.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX 0.71 57.0 3.28e-01 97.6% 10.6%
286927 242.1.1.1 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.70 58.0 4.22e-01 100.0% 50.7%
4413471 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.70 58.0 4.94e-01 100.0% 64.0%
1481299 304.5.1.4 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › CdAMP_rec 0.70 58.0 4.38e-01 100.0% 46.0%
4044550 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.70 58.0 4.84e-01 100.0% 62.5%
3267786 864.1.1.0 ↗ a+b two layers › DLC › DLC › DLC 0.70 58.0 4.78e-01 100.0% 50.0%
3964912 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 58.0 4.96e-01 100.0% 64.9%
3695303 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.69 55.0 4.12e-01 100.0% 57.8%
4124049 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.69 55.0 3.59e-01 97.6% 23.2%
3479702 304.44.1.0 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 0.69 55.0 4.34e-01 100.0% 55.2%
3657448 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.68 55.0 3.98e-01 100.0% 37.9%
4026240 328.6.1.2 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC 0.68 54.0 3.45e-01 100.0% 20.1%
4678670 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.68 54.0 4.63e-01 100.0% 57.5%
3211310 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.67 54.0 4.38e-01 100.0% 60.0%
4193755 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.67 56.0 4.73e-01 100.0% 64.0%
3700148 2486.1.1.3 ↗ a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans 0.66 52.0 2.88e-01 95.2% 5.4%
4999757 304.6.1.1 ↗ a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C 0.66 53.0 3.42e-01 100.0% 25.4%
3423719 812.1.1.0 ↗ a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain 0.66 53.0 4.85e-01 95.2% 100.0%
3915304 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.66 53.0 2.89e-01 95.2% 11.2%
4995222 304.24.1.0 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.66 53.0 4.60e-01 100.0% 68.0%
5043656 304.116.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor 0.66 54.0 4.31e-01 100.0% 73.7%
3867203 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.65 54.0 2.92e-01 97.6% 11.6%
None — 0.65 54.0 3.10e-01 100.0% 21.2%
3838607 225.1.1.3 ↗ a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c 0.64 51.0 3.68e-01 97.6% 51.0%
5076507 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.64 50.0 3.65e-01 100.0% 30.4%
3821254 101.1.2.88 ↗ alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.64 52.0 3.88e-01 100.0% 56.0%
3924304 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.63 52.0 4.66e-01 100.0% 78.5%
4611994 328.6.1.1 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase 0.63 52.0 3.38e-01 100.0% 21.5%
3649316 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.63 53.0 4.12e-01 100.0% 67.0%
3165282 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.63 50.0 3.16e-01 97.6% 20.0%
4991352 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.63 52.0 3.22e-01 100.0% 28.4%
4980535 101.1.2.914 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF6015 0.63 51.0 4.07e-01 97.6% 90.5%
3248329 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 49.0 3.08e-01 97.6% 22.1%
3916934 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.62 51.0 4.20e-01 100.0% 67.1%
3487954 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.62 51.0 4.21e-01 100.0% 71.8%
3556744 101.1.2.79 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_I_A49 0.62 49.0 4.24e-01 97.6% 68.0%
3499772 327.11.2.20 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › BICC1_KH 0.62 51.0 4.12e-01 100.0% 67.8%
4516880 304.8.1.74 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF26539 0.61 50.0 4.23e-01 100.0% 62.5%
4232452 223.1.1.5 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › HrcA 0.61 47.0 3.34e-01 95.2% 59.4%
4002439 2003.1.5.73 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 0.61 46.0 3.21e-01 97.6% 25.8%
3672824 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.61 48.0 3.95e-01 100.0% 58.9%
2531310 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.61 48.0 3.72e-01 100.0% 42.4%
3727608 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.60 49.0 3.81e-01 100.0% 51.8%
4596975 328.6.1.0 ↗ a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like 0.60 47.0 3.18e-01 100.0% 23.8%
2104048 213.1.1.3 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Autoind_synth 0.60 50.0 3.26e-01 100.0% 23.0%
3221782 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.60 48.0 3.27e-01 100.0% 22.2%
3191092 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.60 48.0 3.88e-01 100.0% 57.9%
4934658 304.126.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.60 48.0 4.25e-01 100.0% 65.7%
3971286 213.1.1.3 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Autoind_synth 0.60 47.0 3.24e-01 100.0% 22.1%
3213018 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.60 49.0 4.05e-01 100.0% 64.7%
3875444 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.60 48.0 3.66e-01 100.0% 47.8%
3727504 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.59 49.0 3.84e-01 100.0% 57.0%
3798401 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.59 47.0 3.91e-01 100.0% 61.1%
3639498 101.1.2.722 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF6581, PF28722 0.59 48.0 2.83e-01 97.6% 16.9%
5049300 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.59 45.0 3.20e-01 100.0% 26.3%
4017873 327.11.2.40 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF31052 0.59 47.0 4.11e-01 97.6% 69.9%
3727503 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.58 48.0 3.84e-01 100.0% 60.0%
3200375 101.1.2.569 ↗ alpha arrays › HTH › HTH › winged helix domain › PF28722 0.58 48.0 2.99e-01 97.6% 25.5%
5040946 101.1.2.914 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF6015 0.58 47.0 3.94e-01 97.6% 97.6%
3738229 213.1.1.31 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 0.58 47.0 3.31e-01 97.6% 50.0%
3635417 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.57 44.0 2.86e-01 100.0% 50.7%
4030644 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.57 46.0 3.92e-01 100.0% 75.0%
3213699 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.57 44.0 3.67e-01 100.0% 57.9%
5080275 101.1.2.914 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF6015 0.57 47.0 3.52e-01 97.6% 45.0%
3485088 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.56 44.0 3.40e-01 100.0% 47.5%
4220405 213.1.1.3 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Autoind_synth 0.56 44.0 2.96e-01 100.0% 23.9%
4098707 304.159.1.1 ↗ a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C 0.55 41.0 3.42e-01 97.6% 59.0%
3935690 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.55 44.0 3.29e-01 100.0% 67.7%
4014683 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.52 40.0 3.08e-01 100.0% 67.7%
3505855 101.1.9.0 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain 0.51 40.0 3.42e-01 97.6% 91.3%
D4 medium residues 509-660
PDB
Domain cluster: rep: KF905342.1__AHY82751.1__X__00001__D175-315
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2958186 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 20.0 3.26e-01 70.4% 78.6%
5004280 4112.1.1.1 ↗ beta duplicates or obligate multimers › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX, N-terminal domain-like › YopX 0.52 19.0 2.64e-01 78.3% 64.0%
3628210 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 21.0 2.68e-01 70.4% 58.8%