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NC_074561.1__YP_010771382.1__QIM33_gp12__00012

Bact-Vir

Identity

Accession:: NC_074561 ↗
Kingdom:: phage

Quality

78.9 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Tectiliviricetes› Kalamavirales› Tectiviridae› Betatectivirus› Bacillus_phage_Sole

TaxID: 1260287

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-92

PDB

Domain cluster: representative

CATH (8)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1vwxk00	3.30.720.90	Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 ›	0.56	32.0	3.59e-01	87.6%	72.5%
2cs7A00	3.10.50.90	Alpha Beta › Roll › Chitinase A; domain 3 ›	0.55	29.0	3.37e-01	88.8%	74.5%
5ir2A00	3.50.30.40	Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Ribonuclease E inhibitor RraA/RraA-like	0.55	38.0	2.92e-01	73.0%	85.1%
1miqA02	2.40.70.10	Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases	0.54	42.0	3.51e-01	82.0%	67.8%
1okeB02	3.30.67.10	Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2	0.53	33.0	3.54e-01	80.9%	72.7%
3p54A02	3.30.67.10	Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2	0.52	33.0	3.63e-01	85.4%	80.3%
6epkA02	3.30.67.10	Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2	0.52	33.0	3.56e-01	84.3%	80.3%
4cbvA02	2.40.50.1020	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain	0.51	37.0	3.48e-01	78.7%	87.3%

ECOD (12)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3289164	295.1.1.25 ↗	a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF397	0.77	34.0	3.17e-01	75.3%	34.5%
4668790	3784.1.1.6 ↗	a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › PF26353	0.62	46.0	4.50e-01	77.5%	94.7%
3629491	220.1.1.0 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like	0.58	33.0	3.97e-01	80.9%	89.1%
374819	2487.1.1.8 ↗	a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like	0.56	38.0	2.96e-01	70.8%	85.8%
4962820	2487.1.1.8 ↗	a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like	0.56	38.0	2.90e-01	70.8%	82.3%
3907112	1170.1.1.1 ↗	beta barrels › IL8-related › IL8-related › IL8 › IL8	0.56	30.0	3.40e-01	79.8%	69.2%
4974686	2487.1.1.8 ↗	a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like	0.55	38.0	3.03e-01	73.0%	87.4%
4929983	2487.1.1.8 ↗	a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like	0.55	38.0	2.94e-01	70.8%	85.2%
3288143	2487.1.1.8 ↗	a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like	0.55	37.0	2.81e-01	70.8%	81.2%
3271834	109.4.1.816 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N	0.53	40.0	2.42e-01	83.1%	18.1%
3588521	4.8.1.5 ↗	beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR	0.52	26.0	3.12e-01	78.7%	72.7%
5072949	4.1.1.40 ↗	beta barrels › SH3 › SH3 › SH3 › FeoA	0.50	34.0	3.88e-01	73.0%	96.9%