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YP_010772026.1

Arc-Vir

NC_074638__YP_010772026.1__QIT35-gp36__00036

Identity

Accession:
NC_074638 ↗
Protein ID:
YP_010772026.1 ↗
Kingdom:
archaea

Quality

94.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Nakonvirales› Ahpuchviridae› Kisinvirus› Methanophagales_virus_PBV299

TaxID: 2987730

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 24-127
PDB
Domain cluster: rep: ON615601.1__UTS51982.1__X__00034__D5-121
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n7zA01 2.60.340.10 Mainly Beta › Sandwich › baseplate structural protein gp8, domain 1 › baseplate structural protein gp8, domain 1 0.73 66.0 5.61e-01 98.1% 86.1%
3rbsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 36.0 3.86e-01 71.2% 64.8%
3o0lA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 40.0 4.01e-01 71.2% 63.3%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 42.0 4.07e-01 73.1% 66.4%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 48.0 4.49e-01 96.2% 73.0%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 39.0 3.85e-01 71.2% 65.1%
3aqoA02 3.30.1360.200 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 49.0 4.46e-01 97.1% 87.2%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.54 25.0 3.36e-01 71.2% 93.5%
5dmyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.76e-01 85.6% 67.8%
2x41A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 43.0 4.18e-01 91.3% 79.0%
4i3gA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.99e-01 87.5% 78.9%
2k5vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 38.0 3.93e-01 90.4% 86.7%
7o0eA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.50 38.0 4.21e-01 93.3% 100.0%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 40.0 3.77e-01 84.6% 70.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4932865 3899.1.1.0 ↗ beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 0.86 82.0 7.27e-01 100.0% 75.0%
2504393 3899.1.1.2 ↗ beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 › BW3TFN 0.82 75.0 6.12e-01 98.1% 88.9%
3599565 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.65 32.0 3.67e-01 70.2% 63.7%
3672747 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 45.0 3.82e-01 73.1% 52.9%
5055609 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 43.0 4.66e-01 72.1% 83.5%
3589180 11.1.1.575 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6941 0.63 42.0 3.96e-01 85.6% 56.8%
5083004 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 41.0 4.11e-01 72.1% 64.5%
4960416 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 41.0 4.44e-01 73.1% 83.1%
1837346 11.1.1.182 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.60 42.0 4.05e-01 88.5% 64.1%
3189338 11.1.1.182 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3-like 0.60 41.0 3.29e-01 71.2% 80.8%
3845491 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.59 40.0 3.84e-01 70.2% 60.0%
4961062 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 41.0 4.02e-01 74.0% 67.8%
5033330 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 4.00e-01 73.1% 69.4%
3213270 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 41.0 3.69e-01 74.0% 65.7%
4969051 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 40.0 3.85e-01 73.1% 71.7%
3481000 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 41.0 3.90e-01 94.2% 64.8%
4970106 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 40.0 3.98e-01 87.5% 73.6%
3334339 2484.1.1.157 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.55 41.0 3.17e-01 80.8% 97.3%
5026861 11.1.1.531 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF11 0.55 37.0 4.14e-01 71.2% 91.3%
4971295 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.54 37.0 3.83e-01 78.8% 76.8%
3226172 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 32.0 3.25e-01 72.1% 60.0%
5043858 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 41.0 3.71e-01 86.5% 90.0%
5007993 11.1.1.51 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.50 40.0 3.75e-01 84.6% 71.2%