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YP_010772065.1
Arc-VirNC_074638__YP_010772065.1__QIT35-gp75__00075
Identity
- Accession:
- NC_074638 ↗
- Protein ID:
- YP_010772065.1 ↗
- Kingdom:
- archaea
Quality
94.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Nakonvirales›
Ahpuchviridae›
Kisinvirus›
Methanophagales_virus_PBV299
TaxID: 2987730
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-53
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fblA02 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.61 | 41.0 | 2.88e-01 | 73.1% | 36.1% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.60 | 46.0 | 2.94e-01 | 94.2% | 15.5% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 41.0 | 3.18e-01 | 75.0% | 42.7% |
| 3kw0A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 49.0 | 3.42e-01 | 98.1% | 59.3% |
| 5ixcA01 | 3.40.1090.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytosolic phospholipase A2 catalytic domain › Cytosolic phospholipase A2 catalytic domain | 0.58 | 47.0 | 2.78e-01 | 92.3% | 21.0% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.58 | 46.0 | 2.87e-01 | 90.4% | 23.7% |
| 2o62A02 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 45.0 | 3.43e-01 | 90.4% | 56.9% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.56 | 38.0 | 3.08e-01 | 71.2% | 51.0% |
| 2rprA00 | 2.20.25.240 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.56 | 47.0 | 4.05e-01 | 98.1% | 60.9% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 45.0 | 4.05e-01 | 100.0% | 85.4% |
| 4czxA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 2.62e-01 | 88.5% | 24.4% |
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 41.0 | 3.62e-01 | 92.3% | 82.6% |
| 4izeA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.52 | 43.0 | 3.21e-01 | 100.0% | 95.4% |
| 5a35A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.52 | 45.0 | 3.56e-01 | 100.0% | 55.4% |
| 2vhlA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.50 | 39.0 | 2.58e-01 | 98.1% | 98.0% |
| 6yuqA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 39.0 | 2.64e-01 | 94.2% | 21.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4215069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 4.46e-01 | 90.4% | 86.7% |
| 3584551 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.61 | 42.0 | 2.79e-01 | 73.1% | 17.8% |
| 3490701 | 5.1.5.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › CNH | 0.61 | 42.0 | 2.60e-01 | 75.0% | 19.4% |
| 3938259 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.57 | 39.0 | 2.84e-01 | 75.0% | 23.0% |
| 3950423 | 243.3.1.24 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › LGFP | 0.57 | 46.0 | 3.58e-01 | 96.2% | 56.2% |
| 3992026 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.57 | 48.0 | 4.52e-01 | 98.1% | 83.1% |
| 4022926 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 46.0 | 2.81e-01 | 100.0% | 27.9% |
| 3395585 | 708.1.1.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH | 0.56 | 47.0 | 4.45e-01 | 98.1% | 84.6% |
| 4678616 | 5.1.4.62 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN | 0.54 | 41.0 | 2.49e-01 | 86.5% | 23.9% |
| 4935756 | 242.2.1.0 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like | 0.51 | 32.0 | 3.25e-01 | 84.6% | 61.8% |
| 3164675 | 274.1.1.51 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits › PF27121 | 0.51 | 37.0 | 2.80e-01 | 90.4% | 55.1% |
| 5016434 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 40.0 | 3.75e-01 | 100.0% | 73.3% |