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YP_010772331.1

Arc-Vir

NC_074641__YP_010772331.1__QIT38-gp36__00036

Identity

Accession:
NC_074641 ↗
Protein ID:
YP_010772331.1 ↗
Kingdom:
archaea

Quality

96.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-119
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10049.15 best DUF2283 51.3 1.50e-13 40.7% 98.0%
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.72 31.0 4.69e-01 85.6% 100.0%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.70 33.0 4.63e-01 89.8% 91.5%
2lyxA00 3.10.450.390 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Protein of unknown function DUF3889 0.66 40.0 4.53e-01 88.1% 80.5%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 35.0 4.48e-01 79.7% 89.9%
1fuwA00 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 39.0 4.41e-01 88.1% 82.4%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.61 42.0 4.22e-01 71.2% 100.0%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.60 53.0 4.38e-01 97.5% 75.1%
3ai4A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 52.0 4.10e-01 97.5% 63.3%
2c9jA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 52.0 4.33e-01 97.5% 73.2%
6lofA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 48.0 4.32e-01 86.4% 82.1%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.59 50.0 3.42e-01 90.7% 39.1%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 52.0 4.23e-01 97.5% 70.5%
2pslA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 52.0 4.31e-01 99.2% 72.8%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.59 46.0 4.20e-01 85.6% 83.4%
2wiqA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.58 51.0 4.16e-01 96.6% 69.3%
1h4uA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.58 51.0 4.06e-01 97.5% 64.5%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 39.0 4.13e-01 91.5% 78.6%
2hx5A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.57 51.0 4.79e-01 99.2% 100.0%
1z54A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.56 49.0 4.78e-01 97.5% 98.5%
3ub1D02 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 4.11e-01 91.5% 77.2%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 39.0 3.88e-01 72.0% 95.0%
4k00A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 48.0 4.64e-01 97.5% 97.1%
3r87A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 48.0 4.71e-01 98.3% 98.5%
1njkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 49.0 4.71e-01 99.2% 100.0%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 42.0 4.25e-01 91.5% 82.6%
2nujA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 48.0 4.51e-01 98.3% 98.6%
3butA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.24e-01 83.1% 97.6%
2hljA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 47.0 4.52e-01 96.6% 94.9%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 48.0 4.71e-01 97.5% 100.0%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 48.0 4.44e-01 98.3% 83.8%
5egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 47.0 4.27e-01 97.5% 73.1%
2v1oB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 46.0 4.26e-01 92.4% 85.1%
3uh8A00 2.60.40.3350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 37.0 3.78e-01 71.2% 100.0%
1y7uA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 47.0 4.25e-01 97.5% 74.4%
3hm0A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 46.0 4.55e-01 94.9% 100.0%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 46.0 4.39e-01 95.8% 82.1%
2b39A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 41.0 4.05e-01 80.5% 94.4%
1n9pA00 2.60.40.1400 Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 0.53 43.0 3.65e-01 88.1% 88.3%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 43.0 3.78e-01 89.0% 78.4%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 42.0 3.99e-01 92.4% 72.7%
2pn5A03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 4.23e-01 80.5% 97.1%
2xsgB01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 44.0 3.34e-01 92.4% 68.1%
3e1eC00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 44.0 4.18e-01 93.2% 99.3%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.13e-01 78.8% 96.1%
2gvhB02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 44.0 4.46e-01 94.1% 98.3%
3kh8B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 45.0 4.14e-01 98.3% 96.1%
4ak2A01 2.60.40.2720 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.96e-01 80.5% 93.2%
1pn2B01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 42.0 3.97e-01 92.4% 93.9%
2gvhC01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.51 43.0 4.20e-01 97.5% 92.6%
3bf2A00 3.30.160.150 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain 0.50 37.0 3.65e-01 91.5% 72.0%
2uvaG08 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.50 42.0 3.21e-01 93.2% 43.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4935679 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.70 45.0 5.09e-01 71.2% 85.6%
3968029 3863.1.1.0 beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) 0.69 49.0 4.81e-01 72.9% 91.1%
4336615 1093.1.1.0 a+b two layers › DUF4479 › DUF4479 › DUF4479 0.66 50.0 5.56e-01 97.5% 97.9%
2834612 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.61 54.0 4.36e-01 97.5% 71.5%
1283375 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.60 53.0 4.36e-01 97.5% 72.1%
2458553 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.60 49.0 4.60e-01 86.4% 95.8%
3544378 11.1.1.414 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TMEM106 0.60 46.0 4.15e-01 79.7% 83.2%
3062826 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 52.0 4.23e-01 97.5% 68.1%
358775 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 48.0 4.26e-01 85.6% 78.9%
308837 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 52.0 4.28e-01 97.5% 71.6%
28728 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.59 52.0 4.33e-01 98.3% 74.1%
5002447 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.59 44.0 4.83e-01 79.7% 95.8%
4883811 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.58 51.0 4.20e-01 97.5% 71.6%
1720440 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.58 51.0 4.11e-01 97.5% 67.4%
1157836 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.58 46.0 4.24e-01 85.6% 82.7%
4957407 3414.1.1.13 beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein › PF29994 0.58 45.0 4.34e-01 80.5% 76.2%
2491976 271.1.1.1 beta barrels › GFP-like › GFP-like › GFP-like › GFP 0.57 49.0 4.03e-01 98.3% 69.5%
None 0.56 50.0 4.45e-01 99.2% 82.4%
3935304 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.56 48.0 3.92e-01 97.5% 63.4%
3220419 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.56 47.0 4.83e-01 97.5% 98.2%
3620764 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.55 49.0 4.10e-01 97.5% 72.7%
3813594 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.55 49.0 4.69e-01 99.2% 95.7%
4985149 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.55 48.0 4.68e-01 98.3% 99.3%
5046604 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 42.0 4.32e-01 80.5% 95.7%
3612850 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.55 48.0 4.35e-01 97.5% 76.4%
3263508 222.1.1.8 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_2 0.55 48.0 4.41e-01 97.5% 90.2%
5054514 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 39.0 3.76e-01 72.9% 97.7%
3781788 222.1.1.27 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 0.55 46.0 4.17e-01 93.2% 85.5%
4998827 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.45e-01 81.4% 98.1%
3438167 3863.1.1.1 beta barrels › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Virulence associated protein B (Vapb) › Ysc84 0.54 45.0 3.92e-01 89.8% 88.9%
3393391 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.54 47.0 3.97e-01 97.5% 68.1%
4991711 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.54 48.0 4.44e-01 97.5% 81.3%
3409717 633.33.1.1 alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz 0.54 38.0 3.05e-01 72.9% 68.8%
3611189 222.1.1.10 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 0.54 46.0 4.07e-01 92.4% 79.4%
5064714 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 4.01e-01 81.4% 83.0%
3471415 11.1.1.44 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.54 44.0 4.13e-01 89.8% 98.7%
4446241 222.1.1.17 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.53 44.0 4.16e-01 90.7% 92.4%
4335827 11.1.1.612 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5443 0.53 41.0 3.86e-01 81.4% 87.6%
3301049 4272.1.1.1 a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa 0.53 37.0 3.77e-01 72.9% 77.5%
4182578 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.53 43.0 3.77e-01 90.7% 97.3%
5055758 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 41.0 4.32e-01 83.1% 100.0%
3176816 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.52 35.0 3.30e-01 75.4% 54.7%
3925906 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 42.0 4.07e-01 88.1% 100.0%
4031907 222.1.1.28 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27762 0.52 43.0 4.44e-01 90.7% 100.0%
3729951 4252.1.1.5 beta barrels › AttH-like › AttH-like › AttH-like › Svf1 0.52 43.0 3.83e-01 90.7% 100.0%
5016798 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 39.0 4.21e-01 78.8% 99.0%
3929242 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.51 44.0 4.07e-01 94.1% 96.0%
3642523 222.1.1.4 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT 0.51 43.0 4.01e-01 92.4% 74.5%
3739762 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.51 36.0 3.59e-01 81.4% 70.8%
3928394 11.1.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin 0.51 38.0 4.00e-01 80.5% 88.2%
2617497 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.51 40.0 4.08e-01 91.5% 87.0%
5007179 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 4.22e-01 83.9% 99.0%
3585519 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.50 39.0 3.67e-01 94.9% 67.6%
3214004 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.50 36.0 3.90e-01 93.2% 89.0%
3598259 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.50 41.0 3.98e-01 90.7% 97.8%