Back to structures

YP_010772552.1

Arc-Vir

NC_074647__YP_010772552.1__QIT44-gp04__00004

Identity

Accession:
NC_074647 ↗
Protein ID:
YP_010772552.1 ↗
Kingdom:
archaea

Quality

77.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-31
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kgqA01 1.10.166.10 Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.58 44.0 3.44e-01 87.1% 41.4%
5cs2A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.55 44.0 2.91e-01 100.0% 27.9%
4q5nA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 37.0 2.67e-01 100.0% 19.4%
4hltA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 42.0 2.71e-01 93.5% 42.3%
3v33B00 3.40.50.11980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.51 42.0 2.72e-01 100.0% 62.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4014333 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.59 43.0 4.17e-01 80.6% 91.4%
4998780 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.56 45.0 2.66e-01 96.8% 30.2%
3164257 2002.1.1.111 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI 0.51 41.0 2.44e-01 96.8% 15.9%