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YP_010772569.1
Arc-VirNC_074647__YP_010772569.1__QIT44-gp21__00021
Identity
- Accession:
- NC_074647 ↗
- Protein ID:
- YP_010772569.1 ↗
- Kingdom:
- archaea
Quality
82.2
mean pLDDT
Taxonomy
Trapavirae›
Saleviricota›
Huolimaviricetes›
Haloruvirales›
Pleolipoviridae›
Gammapleolipovirus›
Haloarcula_virus_Hardyhisp2
TaxID: 2811386
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-43
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w0tA00 | 3.30.60.160 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.65 | 52.0 | 4.99e-01 | 97.1% | 86.0% |
| 2eqgA01 | 4.10.240.30 | Few Secondary Structures › Irregular › CD2-Gal4 › | 0.65 | 46.0 | 4.48e-01 | 76.5% | 76.3% |
| 2a25A01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 37.0 | 3.66e-01 | 88.2% | 100.0% |
| 2ghfA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 38.0 | 3.04e-01 | 91.2% | 69.7% |
| 2gicD02 | 1.10.3610.10 | Mainly Alpha › Orthogonal Bundle › Rhabdovirus nucleoprotein-like › Nucleoprotein | 0.52 | 41.0 | 2.63e-01 | 94.1% | 43.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3622162 | 192.2.1.34 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › CpG_bind_C | 0.91 | 80.0 | 4.80e-01 | 97.1% | 16.5% |
| 3411707 | 5086.1.1.4 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › CpG_bind_C | 0.90 | 80.0 | 5.22e-01 | 100.0% | 25.2% |
| 3249736 | 906.2.1.0 ↗ | few secondary structure elements › CCCH zinc finger › SSP1 C3H-type zinc finger › SSP1 C3H-type zinc finger | 0.90 | 74.0 | 7.39e-01 | 91.2% | 88.6% |
| 3740785 | 906.2.1.1 ↗ | few secondary structure elements › CCCH zinc finger › SSP1 C3H-type zinc finger › SSP1 C3H-type zinc finger › PF31218 | 0.87 | 76.0 | 6.13e-01 | 100.0% | 52.3% |
| 3474498 | 906.2.1.0 ↗ | few secondary structure elements › CCCH zinc finger › SSP1 C3H-type zinc finger › SSP1 C3H-type zinc finger | 0.87 | 72.0 | 7.18e-01 | 94.1% | 94.3% |
| 4994973 | 377.1.1.127 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF2116 | 0.83 | 64.0 | 6.64e-01 | 94.1% | 100.0% |
| 3209169 | 375.1.1.274 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ecl1 | 0.76 | 58.0 | 5.99e-01 | 85.3% | 100.0% |
| 3408969 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.73 | 62.0 | 4.93e-01 | 97.1% | 58.6% |
| 3187485 | 931.1.1.12 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › Ecl1 | 0.72 | 52.0 | 5.52e-01 | 79.4% | 100.0% |
| 5030292 | 931.1.1.0 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein | 0.69 | 53.0 | 5.36e-01 | 91.2% | 100.0% |
| 3800970 | 377.9.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like | 0.68 | 55.0 | 5.34e-01 | 97.1% | 87.5% |
| 3405764 | 377.9.1.9 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 | 0.66 | 53.0 | 5.17e-01 | 97.1% | 87.5% |
| 1003796 | 377.10.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › A20-like zinc finger › A20-like zinc finger › zf-A20 | 0.65 | 46.0 | 4.55e-01 | 76.5% | 80.6% |