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NC_074660.1__YP_010773163.1__QIT81_gp51__00051

Bact-Vir

Identity

Accession:: NC_074660 ↗
Kingdom:: phage

Quality

90.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Readingvirus› Pseudomonas_phage_MR15

TaxID: 2711179

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-35

PDB

Domain cluster: representative

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3g2bA00	1.10.10.1150	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD)	0.76	55.0	3.97e-01	88.6%	30.0%
2ld5A00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.72	56.0	4.82e-01	100.0%	52.2%
1u9pA00	1.10.1220.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like	0.71	53.0	4.04e-01	91.4%	34.4%
3uuwB02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.69	52.0	3.31e-01	97.1%	15.8%
3kfuG01	1.10.20.60	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain	0.66	51.0	5.03e-01	88.6%	84.2%
1t98A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.66	50.0	3.77e-01	88.6%	33.3%
7wzwF01	1.10.1070.11	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain	0.65	51.0	3.18e-01	91.4%	16.3%
2k9sA00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.64	55.0	3.94e-01	100.0%	35.5%
4ml0B00	3.30.2310.20	Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like	0.63	45.0	3.29e-01	74.3%	66.7%
2k89A00	3.10.20.870	Alpha Beta › Roll › Ubiquitin-like (UB roll) › PFU (PLAA family ubiquitin binding), C-terminal domain	0.63	49.0	3.81e-01	88.6%	38.7%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3232510	3075.1.1.1 ↗	a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › PFU	0.83	62.0	4.72e-01	80.0%	38.7%
4331694	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.76	55.0	4.50e-01	77.1%	51.7%
3802306	284.1.2.0 ↗	a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases	0.74	57.0	4.20e-01	88.6%	31.6%
3812869	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.74	55.0	3.99e-01	85.7%	29.0%
3318685	284.1.3.2 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C	0.74	56.0	4.03e-01	88.6%	28.6%
3480610	284.1.3.0 ↗	a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain	0.72	57.0	4.56e-01	88.6%	42.9%
3834352	3075.1.1.0 ↗	a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA	0.70	51.0	2.85e-01	80.0%	6.1%
3938541	3075.1.1.0 ↗	a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA	0.70	50.0	4.17e-01	85.7%	45.0%
2722539	101.1.4.0 ↗	alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like	0.69	50.0	3.56e-01	82.9%	26.4%
3702895	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.65	46.0	4.00e-01	80.0%	49.1%
3268716	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.64	47.0	4.11e-01	100.0%	51.4%