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NC_074664.1__YP_010773512.1__QIT86_gp44__00044
Bact-VirNC_074664.1__YP_010773512.1__QIT86_gp44__00044
Identity
- Accession:
- NC_074664 ↗
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Taxonomy
TaxID: 2829367
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 74-140
Domain cluster:
representative
CATH (65)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z99A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.82 | 60.0 | 5.49e-01 | 77.6% | 74.7% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 55.0 | 5.31e-01 | 70.1% | 82.7% |
| 5f7qC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 60.0 | 5.98e-01 | 79.1% | 97.1% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 59.0 | 6.23e-01 | 79.1% | 86.4% |
| 3tgnB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 56.0 | 5.82e-01 | 73.1% | 95.2% |
| 1r1uB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 56.0 | 4.99e-01 | 73.1% | 61.3% |
| 1s3jA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 57.0 | 5.85e-01 | 74.6% | 95.3% |
| 1a04A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 54.0 | 5.09e-01 | 70.1% | 61.3% |
| 4go1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 54.0 | 5.92e-01 | 70.1% | 92.6% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 57.0 | 5.85e-01 | 74.6% | 92.1% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 54.0 | 5.72e-01 | 70.1% | 86.2% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 54.0 | 5.96e-01 | 71.6% | 94.4% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 57.0 | 4.39e-01 | 77.6% | 41.3% |
| 2w48B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.78 | 53.0 | 5.88e-01 | 70.1% | 98.1% |
| 2cfxA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 53.0 | 5.99e-01 | 70.1% | 98.0% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 58.0 | 6.03e-01 | 79.1% | 95.2% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.77 | 62.0 | 5.00e-01 | 89.6% | 46.0% |
| 3g3zA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 54.0 | 5.53e-01 | 73.1% | 95.3% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 59.0 | 5.43e-01 | 82.1% | 75.9% |
| 4wcgA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 58.0 | 6.02e-01 | 80.6% | 96.7% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 51.0 | 5.08e-01 | 70.1% | 70.0% |
| 4gvpA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.76 | 52.0 | 3.64e-01 | 71.6% | 24.3% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.76 | 59.0 | 5.91e-01 | 86.6% | 82.4% |
| 1gdtB03 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.76 | 49.0 | 5.71e-01 | 82.1% | 100.0% |
| 1o57A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 54.0 | 5.33e-01 | 76.1% | 93.1% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 55.0 | 4.17e-01 | 77.6% | 40.4% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 59.0 | 5.93e-01 | 83.6% | 83.6% |
| 4ivnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 53.0 | 5.14e-01 | 74.6% | 77.6% |
| 1mgtA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 56.0 | 5.30e-01 | 80.6% | 79.0% |
| 3k9tA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.75 | 51.0 | 5.19e-01 | 71.6% | 72.7% |
| 4o5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 5.18e-01 | 74.6% | 81.7% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 59.0 | 5.77e-01 | 86.6% | 86.3% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 57.0 | 4.62e-01 | 83.6% | 48.0% |
| 3cuoD00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 52.0 | 4.65e-01 | 74.6% | 61.7% |
| 3iuoA00 | 1.10.10.1390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ | 0.73 | 56.0 | 4.79e-01 | 83.6% | 93.6% |
| 1k78A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 50.0 | 5.05e-01 | 76.1% | 72.7% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.72 | 49.0 | 4.97e-01 | 74.6% | 72.3% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 51.0 | 5.41e-01 | 74.6% | 98.2% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 56.0 | 4.80e-01 | 83.6% | 63.5% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 49.0 | 5.32e-01 | 73.1% | 89.3% |
| 3mklA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 59.0 | 5.10e-01 | 91.0% | 61.5% |
| 3dv8A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 51.0 | 4.85e-01 | 76.1% | 78.2% |
| 2hr3D02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 53.0 | 5.45e-01 | 82.1% | 95.2% |
| 3onqA03 | 1.10.10.2840 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain | 0.70 | 50.0 | 4.03e-01 | 76.1% | 39.7% |
| 3keoA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 5.08e-01 | 79.1% | 83.3% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 52.0 | 5.24e-01 | 82.1% | 88.4% |
| 2h09A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 5.68e-01 | 95.5% | 95.8% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 5.05e-01 | 83.6% | 78.2% |
| 2ip2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 56.0 | 5.17e-01 | 88.1% | 76.2% |
| 3h4cA02 | 1.10.472.110 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.68 | 48.0 | 4.08e-01 | 74.6% | 51.8% |
| 2e18A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 50.0 | 3.36e-01 | 79.1% | 21.5% |
| 2rasA01 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 47.0 | 3.41e-01 | 73.1% | 29.8% |
| 2o3fA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 4.60e-01 | 77.6% | 69.5% |
| 2r3sB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.83e-01 | 83.6% | 72.8% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 50.0 | 4.02e-01 | 83.6% | 48.2% |
| 2zkzC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 4.40e-01 | 79.1% | 65.5% |
| 5cz2G00 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.65 | 40.0 | 4.62e-01 | 71.6% | 100.0% |
| 2jrtA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 48.0 | 4.47e-01 | 80.6% | 74.4% |
| 2r0qC02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.65 | 49.0 | 5.35e-01 | 83.6% | 100.0% |
| 4d7kA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 52.0 | 4.66e-01 | 89.6% | 91.7% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 46.0 | 4.91e-01 | 79.1% | 98.3% |
| 3gwzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 4.63e-01 | 92.5% | 100.0% |
| 1k6yA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.61 | 41.0 | 4.61e-01 | 76.1% | 100.0% |
| 3mczA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 49.0 | 4.73e-01 | 100.0% | 86.6% |
| 1p4wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 39.0 | 3.64e-01 | 85.1% | 90.8% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4540842 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.87 | 78.0 | 5.67e-01 | 97.0% | 42.4% |
| 3944759 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 59.0 | 6.70e-01 | 79.1% | 100.0% |
| 3931341 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 64.0 | 5.78e-01 | 86.6% | 62.2% |
| 3979732 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 64.0 | 6.49e-01 | 82.1% | 89.2% |
| 3283589 | 101.1.1.368 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 | 0.81 | 56.0 | 6.36e-01 | 80.6% | 98.0% |
| 4418437 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.80 | 67.0 | 6.79e-01 | 89.6% | 96.9% |
| 5009839 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.79 | 57.0 | 4.43e-01 | 76.1% | 44.3% |
| 3589152 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 51.0 | 5.99e-01 | 74.6% | 100.0% |
| 3944142 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 55.0 | 6.03e-01 | 73.1% | 94.5% |
| 3286669 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 55.0 | 6.06e-01 | 73.1% | 94.5% |
| 4245572 | 101.1.8.16 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 | 0.78 | 56.0 | 5.56e-01 | 76.1% | 74.3% |
| 4031756 | 101.1.2.645 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_40 | 0.78 | 53.0 | 4.93e-01 | 71.6% | 58.8% |
| 3469752 | 101.1.1.35 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq | 0.78 | 51.0 | 6.01e-01 | 71.6% | 100.0% |
| 2792505 | 101.1.2.139 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_23 | 0.77 | 55.0 | 5.84e-01 | 74.6% | 94.7% |
| 4946254 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 50.0 | 5.90e-01 | 74.6% | 100.0% |
| 4339699 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.77 | 53.0 | 5.76e-01 | 71.6% | 96.4% |
| 5011649 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 47.0 | 5.43e-01 | 70.1% | 93.3% |
| 3280379 | 101.1.3.4 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 | 0.74 | 52.0 | 4.57e-01 | 76.1% | 50.0% |
| 3668668 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.74 | 55.0 | 4.44e-01 | 79.1% | 46.4% |
| 5061940 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 52.0 | 5.57e-01 | 77.6% | 90.9% |
| 5030780 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.73 | 50.0 | 5.54e-01 | 73.1% | 96.0% |
| None | — | 0.73 | 54.0 | 4.15e-01 | 79.1% | 38.7% | |
| 3976262 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.73 | 59.0 | 4.96e-01 | 89.6% | 58.3% |
| 4952035 | 101.1.1.17 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 | 0.72 | 59.0 | 6.17e-01 | 95.5% | 98.3% |
| 5077769 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.72 | 51.0 | 5.70e-01 | 74.6% | 100.0% |
| 3662896 | 101.1.1.411 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 | 0.72 | 53.0 | 4.36e-01 | 79.1% | 46.4% |
| 2323748 | 101.1.1.88 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › RecQ-1-like_HTH | 0.72 | 55.0 | 5.77e-01 | 83.6% | 93.4% |
| 3281228 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 55.0 | 5.63e-01 | 88.1% | 86.2% |
| 4554905 | 101.1.1.18 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 | 0.72 | 48.0 | 5.08e-01 | 70.1% | 81.7% |
| 3459967 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 54.0 | 4.45e-01 | 80.6% | 51.7% |
| 3280630 | 101.1.1.2 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC | 0.71 | 56.0 | 5.93e-01 | 86.6% | 95.0% |
| 3952688 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 55.0 | 5.38e-01 | 89.6% | 76.0% |
| 3289138 | 101.1.1.18 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 | 0.71 | 54.0 | 5.79e-01 | 85.1% | 100.0% |
| 3166400 | 101.1.1.63 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 | 0.71 | 51.0 | 5.20e-01 | 79.1% | 78.5% |
| 3279376 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 51.0 | 4.56e-01 | 77.6% | 60.0% |
| 5071071 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 46.0 | 4.56e-01 | 73.1% | 64.3% |
| 5062514 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.70 | 46.0 | 5.30e-01 | 73.1% | 100.0% |
| 4989022 | 101.1.2.881 ↗ | alpha arrays › HTH › HTH › winged helix domain › UPF0175 | 0.70 | 46.0 | 5.32e-01 | 70.1% | 100.0% |
| 3978620 | 101.1.1.30 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 | 0.70 | 48.0 | 3.61e-01 | 71.6% | 30.9% |
| 3948820 | 101.1.1.29 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 | 0.69 | 48.0 | 4.39e-01 | 73.1% | 56.7% |
| 5014241 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.69 | 46.0 | 4.27e-01 | 71.6% | 54.1% |
| 5043001 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.69 | 57.0 | 4.82e-01 | 88.1% | 82.9% |
| 4952807 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.68 | 52.0 | 4.99e-01 | 88.1% | 72.0% |
| 3984815 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.68 | 50.0 | 5.43e-01 | 79.1% | 98.2% |
| 4165105 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.68 | 50.0 | 4.65e-01 | 79.1% | 67.1% |
| 5063318 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.68 | 51.0 | 5.52e-01 | 83.6% | 98.2% |
| 1291586 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.67 | 53.0 | 4.26e-01 | 88.1% | 52.5% |
| 4479119 | 101.1.1.13 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 | 0.67 | 46.0 | 4.97e-01 | 71.6% | 87.3% |
| 4945097 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 48.0 | 5.04e-01 | 76.1% | 88.3% |
| 4173484 | 148.1.2.1 ↗ | alpha arrays › Histone-like › Histone-related › double Clp-N › Clp_N | 0.66 | 54.0 | 3.79e-01 | 91.0% | 65.0% |
| 4277585 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 48.0 | 5.08e-01 | 79.1% | 94.5% |
| 4350602 | 101.1.8.14 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 | 0.66 | 46.0 | 4.68e-01 | 82.1% | 75.4% |
| 5045749 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.65 | 46.0 | 4.66e-01 | 82.1% | 76.9% |
| 4654073 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.64 | 47.0 | 4.56e-01 | 82.1% | 70.7% |
| 4950777 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.62 | 46.0 | 4.61e-01 | 89.6% | 77.1% |
| 5064868 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.60 | 48.0 | 4.40e-01 | 88.1% | 66.7% |
| 4993165 | 101.1.11.203 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 | 0.55 | 46.0 | 4.18e-01 | 98.5% | 68.4% |
D2
high
residues 153-198
Domain cluster:
rep: IMGVR_UViG_3300005835_000100-3300005835-Ga0078910_10067915__D4-44
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.85 | 66.0 | 4.64e-01 | 100.0% | 28.2% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.82 | 72.0 | 6.77e-01 | 93.5% | 81.5% |
| 1zbdB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.76 | 66.0 | 4.79e-01 | 95.7% | 35.8% |
| 2gviA03 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.75 | 49.0 | 5.46e-01 | 78.3% | 91.2% |
| 2cjsC01 | 3.30.60.120 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 52.0 | 5.62e-01 | 82.6% | 100.0% |
| 3b8mC02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 43.0 | 3.23e-01 | 73.9% | 32.7% |
| 2v9kA03 | 3.30.70.2510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 39.0 | 2.88e-01 | 71.7% | 100.0% |
| 2hf1A01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.54 | 37.0 | 3.62e-01 | 76.1% | 80.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4979944 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.99 | 78.0 | 8.35e-01 | 82.6% | 95.0% |
| 3211179 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.86 | 73.0 | 5.89e-01 | 100.0% | 50.6% |
| 4013051 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.85 | 78.0 | 6.20e-01 | 100.0% | 56.5% |
| 3397474 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.82 | 63.0 | 6.73e-01 | 91.3% | 95.0% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.82 | 70.0 | 5.64e-01 | 100.0% | 50.6% |
| 3539687 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.82 | 75.0 | 6.00e-01 | 100.0% | 84.7% |
| 3744636 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.81 | 73.0 | 5.75e-01 | 100.0% | 90.0% |
| 3457383 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.80 | 73.0 | 5.73e-01 | 100.0% | 85.6% |
| 3636201 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.80 | 72.0 | 5.29e-01 | 100.0% | 89.6% |
| 3666975 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.79 | 73.0 | 5.82e-01 | 100.0% | 89.4% |
| 3735240 | 376.1.1.114 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf_RING-like | 0.78 | 63.0 | 5.73e-01 | 97.8% | 66.7% |
| 3358136 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.78 | 70.0 | 5.69e-01 | 97.8% | 95.0% |
| 3567692 | 376.1.3.85 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › Znf_SCAND3 | 0.76 | 67.0 | 6.59e-01 | 100.0% | 96.0% |
| 3692666 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 47.0 | 5.57e-01 | 73.9% | 100.0% |
| 3181845 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.74 | 53.0 | 5.21e-01 | 80.4% | 70.0% |
| 3607247 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 52.0 | 5.70e-01 | 82.6% | 97.1% |
| 3395505 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.73 | 54.0 | 5.48e-01 | 89.1% | 82.2% |
| 3926338 | 376.1.1.94 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_IRF-2BP1_2 | 0.71 | 62.0 | 4.89e-01 | 97.8% | 90.5% |
| 4990133 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 52.0 | 4.96e-01 | 82.6% | 69.1% |
| 3858618 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.69 | 57.0 | 4.73e-01 | 100.0% | 52.5% |
| 3818617 | 376.1.1.103 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41 | 0.69 | 53.0 | 5.10e-01 | 93.5% | 72.7% |
| 3716795 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 49.0 | 5.40e-01 | 82.6% | 100.0% |
| 5033522 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 57.0 | 5.62e-01 | 100.0% | 90.0% |
| 3829033 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 55.0 | 4.68e-01 | 97.8% | 53.8% |
| 3301048 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.67 | 51.0 | 5.41e-01 | 89.1% | 97.5% |
| 3566304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 49.0 | 5.24e-01 | 89.1% | 95.0% |
| 4977157 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 50.0 | 5.08e-01 | 89.1% | 88.9% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.63 | 47.0 | 4.92e-01 | 82.6% | 95.0% |
| 3336254 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 47.0 | 4.78e-01 | 84.8% | 86.7% |
| 4562058 | 377.1.1.31 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › YHS | 0.59 | 44.0 | 4.49e-01 | 87.0% | 86.7% |
| 3177203 | 375.14.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) › Rubredoxin-like domain in leucyl-tRNA synthetase (LS1) | 0.57 | 40.0 | 4.04e-01 | 80.4% | 77.8% |
| 3567761 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.56 | 41.0 | 4.24e-01 | 89.1% | 97.5% |
| 3913312 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.56 | 44.0 | 4.46e-01 | 89.1% | 88.9% |
| 3300469 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.55 | 40.0 | 4.00e-01 | 89.1% | 76.0% |
| 5071141 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 43.0 | 4.37e-01 | 89.1% | 93.3% |
| 3907975 | 377.1.1.50 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › ZMYM4 | 0.54 | 40.0 | 4.10e-01 | 89.1% | 88.9% |
| 3411509 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.54 | 41.0 | 4.22e-01 | 89.1% | 91.1% |
| 5046264 | 243.1.1.126 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6935 | 0.53 | 39.0 | 2.68e-01 | 89.1% | 22.4% |
| 5010149 | 377.1.1.131 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TRASH_HVO_1752_C | 0.51 | 38.0 | 3.95e-01 | 87.0% | 95.0% |