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NC_074751.1__YP_010774082.1__QJS24_gp28__00028
Bact-VirNC_074751.1__YP_010774082.1__QJS24_gp28__00028
Identity
- Accession:
- NC_074751 ↗
- Kingdom:
- phage
Quality
73.6
mean pLDDT
Taxonomy
TaxID: 2777363
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-115
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsdA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 38.0 | 4.67e-01 | 86.4% | 94.0% |
| 2i1sA00 | 3.10.290.30 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › MM3350-like | 0.61 | 45.0 | 3.85e-01 | 77.3% | 71.9% |
| 7dm9A01 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.57 | 42.0 | 3.65e-01 | 76.4% | 68.7% |
| 3gqcC04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.56 | 39.0 | 3.83e-01 | 70.9% | 78.3% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.55 | 38.0 | 3.50e-01 | 71.8% | 94.8% |
| 1t3qB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.55 | 39.0 | 3.33e-01 | 75.5% | 63.4% |
| 1ffvB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 39.0 | 3.31e-01 | 77.3% | 62.6% |
| 3hrdB01 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 38.0 | 3.46e-01 | 76.4% | 75.6% |
| 1lshA01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.53 | 37.0 | 2.85e-01 | 72.7% | 96.6% |
| 1r75A00 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 38.0 | 3.90e-01 | 75.5% | 100.0% |
| 4g29A00 | 3.10.670.10 | Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. | 0.51 | 45.0 | 3.95e-01 | 99.1% | 91.0% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.51 | 36.0 | 3.56e-01 | 72.7% | 82.5% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.50 | 39.0 | 3.37e-01 | 83.6% | 91.1% |
| 4k7rA02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.50 | 26.0 | 3.02e-01 | 76.4% | 67.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4008166 | 3115.1.1.10 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF27430 | 0.65 | 51.0 | 5.47e-01 | 87.3% | 94.7% |
| 3857592 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.63 | 39.0 | 4.26e-01 | 83.6% | 75.6% |
| 4502514 | 221.6.1.1 ↗ | a+b two layers › beta-Grasp › MM3350-like › MM3350-like › PRiA4_ORF3 | 0.62 | 46.0 | 3.81e-01 | 77.3% | 65.8% |
| 1681825 | 10.27.1.2 ↗ | beta sandwiches › jelly-roll › Polyhedrin › Polyhedrin › CPV_Polyhedrin | 0.61 | 50.0 | 3.82e-01 | 88.2% | 83.0% |
| 3391889 | 11.1.6.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › UPA | 0.61 | 49.0 | 4.65e-01 | 86.4% | 97.7% |
| 3525261 | 11.1.6.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › UPA domain › UPA | 0.59 | 48.0 | 4.33e-01 | 86.4% | 96.7% |
| 4005087 | 5084.5.1.8 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM | 0.57 | 30.0 | 2.36e-01 | 77.3% | 24.0% |
| 3964096 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.56 | 40.0 | 3.47e-01 | 73.6% | 93.7% |
| 4927081 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.56 | 38.0 | 3.52e-01 | 70.0% | 98.6% |
| 3540023 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 34.0 | 3.73e-01 | 80.9% | 74.4% |
| 4937593 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.55 | 39.0 | 3.15e-01 | 72.7% | 98.2% |
| 5033918 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.54 | 37.0 | 3.23e-01 | 70.9% | 95.0% |
| 5055303 | 303.1.1.1 ↗ | a+b four layers › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › Pyruvoyl-dependent histidine and arginine decarboxylases › PvlArgDC | 0.54 | 38.0 | 3.45e-01 | 77.3% | 52.3% |
| 4362579 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.53 | 37.0 | 3.22e-01 | 72.7% | 99.4% |
| 4136961 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.53 | 37.0 | 3.21e-01 | 72.7% | 99.4% |
| 3390429 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 37.0 | 3.40e-01 | 71.8% | 82.8% |
| 5015520 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.52 | 37.0 | 3.06e-01 | 73.6% | 94.3% |
| 3395136 | 2484.1.1.50 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT | 0.52 | 38.0 | 2.56e-01 | 78.2% | 82.9% |
| 3743260 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.52 | 38.0 | 3.43e-01 | 76.4% | 83.3% |
| 5065385 | 4252.1.1.12 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF7064 | 0.52 | 36.0 | 3.18e-01 | 71.8% | 98.8% |
| 5014023 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.51 | 36.0 | 3.12e-01 | 73.6% | 93.5% |
| 4292366 | 9.1.1.14 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › CpeS | 0.51 | 35.0 | 3.01e-01 | 70.9% | 99.5% |
| 5037122 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.51 | 36.0 | 3.01e-01 | 72.7% | 91.3% |
| 441034 | 3386.1.1.4 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C | 0.51 | 36.0 | 3.55e-01 | 73.6% | 80.0% |
| 5036836 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.51 | 36.0 | 2.93e-01 | 74.5% | 92.6% |
| 4638995 | 71.1.1.15 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › UCP033729 | 0.51 | 36.0 | 3.06e-01 | 73.6% | 87.6% |
| 4075543 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.50 | 34.0 | 2.52e-01 | 70.9% | 99.3% |