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NC_074758.1__YP_010774540.1__QJV46_gp34__00034
Bact-VirNC_074758.1__YP_010774540.1__QJV46_gp34__00034
Identity
- Accession:
- NC_074758 ↗
- Kingdom:
- phage
Quality
93.5
mean pLDDT
Taxonomy
TaxID: 2902690
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-40_84-100_114-134
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 60.0 | 5.03e-01 | 100.0% | 89.5% |
| 4da2A02 | 3.40.1350.60 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.61 | 50.0 | 4.09e-01 | 92.3% | 96.7% |
| 1flgA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.60 | 43.0 | 2.57e-01 | 75.6% | 23.5% |
| 1i1iP02 | 3.40.390.10 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › Collagenase (Catalytic Domain) | 0.59 | 46.0 | 3.80e-01 | 87.2% | 99.3% |
| 4ew5A00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.58 | 34.0 | 3.11e-01 | 87.2% | 43.1% |
| 4qbnA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 52.0 | 4.92e-01 | 100.0% | 97.8% |
| 2l1sA00 | 3.10.450.160 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › inner membrane protein cigr | 0.55 | 33.0 | 3.30e-01 | 88.5% | 56.6% |
| 4pxdA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.36e-01 | 73.1% | 70.4% |
| 3lp9A00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.54 | 45.0 | 3.23e-01 | 91.0% | 93.0% |
| 3fyfA00 | 2.40.128.410 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 41.0 | 3.41e-01 | 88.5% | 80.5% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.52 | 40.0 | 3.80e-01 | 93.6% | 68.4% |
| 1fblA02 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.51 | 42.0 | 3.18e-01 | 91.0% | 93.7% |
| 7x3hA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 29.0 | 2.63e-01 | 88.5% | 35.3% |
| 3odtA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 42.0 | 2.88e-01 | 93.6% | 91.9% |
| 3ow8C00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 38.0 | 2.70e-01 | 87.2% | 88.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3838862 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.68 | 60.0 | 4.82e-01 | 100.0% | 87.1% |
| 4055561 | 7503.1.1.19 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain › PGBA_N | 0.58 | 46.0 | 4.38e-01 | 87.2% | 78.9% |
| 3485654 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 40.0 | 2.54e-01 | 74.4% | 48.0% |
| 4026544 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 38.0 | 2.58e-01 | 71.8% | 47.2% |
| 3849084 | 5.1.11.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › WD40 | 0.56 | 39.0 | 2.46e-01 | 73.1% | 34.3% |
| 3665959 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.55 | 43.0 | 2.82e-01 | 85.9% | 97.8% |
| 3682129 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.54 | 43.0 | 2.83e-01 | 87.2% | 98.3% |
| 3459291 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.51 | 40.0 | 2.73e-01 | 88.5% | 79.7% |
| 3892646 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.51 | 42.0 | 3.13e-01 | 91.0% | 88.5% |
| 5036626 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 42.0 | 2.67e-01 | 92.3% | 98.3% |
| 3333781 | 12.3.1.13 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C | 0.50 | 39.0 | 2.72e-01 | 87.2% | 78.3% |
D2
medium
residues 41-83_101-113
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3472396 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.51 | 41.0 | 2.51e-01 | 96.4% | 51.1% |
| 4878869 | 3261.1.1.1 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON | 0.51 | 40.0 | 3.39e-01 | 87.5% | 70.5% |
| 3716413 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 41.0 | 2.96e-01 | 100.0% | 55.9% |