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NC_074758.1__YP_010774562.1__QJV46_gp56__00056

Bact-Vir

NC_074758.1__YP_010774562.1__QJV46_gp56__00056

Identity

Accession:
NC_074758 ↗
Kingdom:
phage

Quality

74.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Serbinvirus› Serratia_phage_vB_SmaS_Opt-155

TaxID: 2902690

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-60
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y1aA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.72 58.0 4.88e-01 96.0% 100.0%
4c5fA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.66 55.0 3.87e-01 96.0% 61.3%
3vxgA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.66 55.0 3.31e-01 90.0% 17.4%
3fi7A01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.66 55.0 4.20e-01 100.0% 63.1%
3hjeA03 1.10.150.200 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 0.64 54.0 4.44e-01 94.0% 60.4%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 3.93e-01 74.0% 72.5%
4qdnA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.61 49.0 3.96e-01 100.0% 67.8%
2ijrA02 1.10.3530.10 Mainly Alpha › Orthogonal Bundle › Api92-like › Api92-like 0.61 41.0 2.79e-01 70.0% 75.4%
3feyA02 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 44.0 3.03e-01 86.0% 27.1%
6fakA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.55 44.0 3.92e-01 100.0% 79.0%
3p0uA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.54 43.0 2.98e-01 100.0% 45.5%
7cgpJ01 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.54 39.0 3.43e-01 80.0% 54.9%
5y6qB02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.52 40.0 3.31e-01 94.0% 70.8%
2fh0A00 1.10.8.140 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain 0.51 39.0 3.51e-01 94.0% 67.9%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3952601 103.12.1.1 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.72 56.0 4.96e-01 84.0% 64.3%
4115140 103.1.1.24 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › BIRC2-3-like_UBA 0.66 54.0 5.03e-01 96.0% 83.1%
3593422 70.3.1.0 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like 0.66 46.0 2.74e-01 74.0% 34.2%
3439369 11.1.1.837 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TAF2_3rd 0.62 45.0 3.01e-01 84.0% 20.4%
3890365 103.1.1.102 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UBA_RNF31 0.61 49.0 4.66e-01 98.0% 75.4%
3733418 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.60 50.0 3.30e-01 98.0% 47.7%
3787527 142.3.1.1 ↗ alpha complex topology › Sigma2 domain-like › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Mitochondrial morphogenesis protein Sld7 C-terminal domain › Sld7_C 0.58 46.0 4.10e-01 100.0% 95.3%
4358185 2498.1.1.22 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY 0.57 46.0 3.46e-01 94.0% 37.0%
3852757 108.1.1.99 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6, EF-hand_7 0.56 43.0 3.16e-01 96.0% 68.8%
3385972 1031.1.1.0 ↗ a+b complex topology › Rifampin phosphotransferase RPH-Lm middle domain › Rifampin phosphotransferase RPH-Lm middle domain › Rifampin phosphotransferase RPH-Lm middle domain 0.54 45.0 2.64e-01 96.0% 11.0%
3533723 3914.1.1.4 ↗ alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMC 0.53 46.0 2.68e-01 100.0% 76.3%
4485624 108.1.1.29 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.53 44.0 3.72e-01 96.0% 81.1%
4486891 5059.1.1.5 ↗ alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA 0.52 42.0 2.62e-01 96.0% 65.8%
3286211 101.1.4.0 ↗ alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.52 39.0 3.75e-01 86.0% 91.7%
3195268 601.54.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 0.51 39.0 3.04e-01 94.0% 81.5%
D2 high residues 70-120
PDB
Domain cluster: representative
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.87 69.0 5.06e-01 92.2% 34.9%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 70.0 6.35e-01 88.2% 70.1%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 6.70e-01 88.2% 96.0%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 5.91e-01 88.2% 67.1%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 6.62e-01 94.1% 96.7%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 67.0 6.58e-01 90.2% 90.7%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 57.0 5.63e-01 76.5% 70.4%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 6.46e-01 94.1% 98.4%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.99e-01 88.2% 100.0%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 64.0 5.89e-01 88.2% 69.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 61.0 6.24e-01 84.3% 92.0%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.82e-01 94.1% 79.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 5.52e-01 100.0% 68.3%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 56.0 6.17e-01 78.4% 100.0%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 64.0 6.25e-01 90.2% 89.1%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 4.79e-01 96.1% 45.0%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.60e-01 94.1% 76.5%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.25e-01 94.1% 96.8%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 4.89e-01 100.0% 42.3%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 69.0 6.02e-01 100.0% 75.0%
2fa5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 4.84e-01 98.0% 43.2%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 4.84e-01 98.0% 49.3%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.77 56.0 5.51e-01 84.3% 73.2%
7l1iA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 4.70e-01 98.0% 45.1%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.76 66.0 4.53e-01 98.0% 49.4%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 4.80e-01 100.0% 66.7%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 68.0 4.87e-01 100.0% 48.6%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 4.74e-01 98.0% 45.9%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.80e-01 98.0% 45.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 4.81e-01 100.0% 51.8%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 68.0 4.76e-01 100.0% 44.4%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 4.87e-01 98.0% 52.7%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 6.36e-01 96.1% 90.7%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 4.71e-01 98.0% 48.6%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 6.18e-01 100.0% 93.7%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.73e-01 98.0% 46.4%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.73e-01 98.0% 94.7%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 5.63e-01 100.0% 81.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.76e-01 96.1% 93.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 66.0 5.37e-01 100.0% 71.3%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 4.78e-01 100.0% 56.8%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.36e-01 86.3% 69.7%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 4.84e-01 100.0% 49.6%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.56e-01 90.2% 73.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.37e-01 92.2% 91.8%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.60e-01 100.0% 72.5%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.73e-01 94.1% 100.0%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.09e-01 92.2% 88.1%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 4.55e-01 98.0% 47.9%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.43e-01 88.2% 71.4%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 52.0 5.29e-01 78.4% 76.5%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 53.0 5.52e-01 82.4% 88.9%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 53.0 4.87e-01 80.4% 62.9%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.63e-01 98.0% 93.1%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.31e-01 100.0% 75.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.58e-01 100.0% 78.7%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 59.0 5.78e-01 94.1% 83.9%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 54.0 5.33e-01 82.4% 89.1%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.67e-01 100.0% 95.7%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.52e-01 88.2% 86.2%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 5.55e-01 88.2% 87.8%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 5.07e-01 92.2% 62.5%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 60.0 5.97e-01 96.1% 94.2%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 50.0 4.65e-01 74.5% 60.0%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.54e-01 96.1% 76.9%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.83e-01 96.1% 100.0%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 56.0 4.64e-01 88.2% 54.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 5.13e-01 98.0% 66.7%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.51e-01 94.1% 100.0%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 53.0 5.64e-01 82.4% 95.5%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.32e-01 94.1% 87.3%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 60.0 5.32e-01 98.0% 93.3%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 59.0 3.78e-01 96.1% 19.1%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.33e-01 92.2% 76.7%
1o57A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 5.15e-01 96.1% 73.6%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.41e-01 100.0% 80.6%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.69 49.0 5.14e-01 78.4% 84.8%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.28e-01 94.1% 73.4%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.69 60.0 4.03e-01 100.0% 38.5%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.70e-01 100.0% 98.3%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.27e-01 100.0% 89.5%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.68 58.0 4.36e-01 98.0% 47.3%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.68 48.0 5.09e-01 82.4% 95.1%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 52.0 4.28e-01 90.2% 45.4%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 47.0 4.94e-01 76.5% 97.6%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 4.71e-01 92.2% 85.0%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 48.0 4.23e-01 76.5% 60.5%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 56.0 4.76e-01 100.0% 77.3%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 52.0 4.32e-01 96.1% 49.5%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 53.0 3.76e-01 100.0% 62.1%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.37e-01 98.0% 82.9%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 54.0 4.63e-01 100.0% 73.3%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.98e-01 96.1% 96.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945046 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 70.0 5.46e-01 88.2% 45.7%
5024765 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.85 77.0 6.53e-01 98.0% 73.8%
5053746 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 69.0 6.03e-01 88.2% 61.3%
5030083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 69.0 7.05e-01 88.2% 94.0%
5044655 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 67.0 6.82e-01 86.3% 92.0%
5060354 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 68.0 6.25e-01 88.2% 73.8%
5014584 101.1.2.932 ↗ alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.83 73.0 6.07e-01 96.1% 100.0%
5047331 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 5.50e-01 88.2% 53.3%
4980944 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 5.72e-01 88.2% 60.0%
4010472 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.83 67.0 6.80e-01 88.2% 96.0%
4984018 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 70.0 6.29e-01 94.1% 95.7%
5038647 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 74.0 6.63e-01 100.0% 92.9%
5067775 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 72.0 6.02e-01 98.0% 80.0%
4939633 101.1.2.932 ↗ alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.81 72.0 6.69e-01 98.0% 92.1%
3958096 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 65.0 5.36e-01 88.2% 51.1%
5060818 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.81 67.0 5.89e-01 92.2% 81.3%
4952959 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 70.0 6.26e-01 96.1% 85.7%
5062037 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.80 64.0 6.50e-01 88.2% 94.0%
4952541 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 55.0 4.45e-01 76.5% 38.0%
5018201 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.78 66.0 6.31e-01 94.1% 96.7%
4948953 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.78 65.0 6.07e-01 94.1% 98.5%
4934191 101.1.2.15 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR 0.78 69.0 5.06e-01 100.0% 49.6%
5052610 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 63.0 6.02e-01 90.2% 85.0%
3290058 101.1.2.26 ↗ alpha arrays › HTH › HTH › winged helix domain › HxlR 0.78 68.0 4.87e-01 98.0% 49.0%
5021422 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 67.0 6.21e-01 98.0% 93.8%
4541333 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.42e-01 92.2% 96.0%
4458444 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 63.0 5.12e-01 96.1% 49.5%
4983312 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.76 68.0 5.65e-01 100.0% 76.1%
5046600 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 60.0 5.06e-01 90.2% 94.4%
3738604 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 5.17e-01 100.0% 62.9%
2759 101.1.3.1 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.75 66.0 6.11e-01 100.0% 90.8%
4454772 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 60.0 5.52e-01 90.2% 69.2%
4007596 101.1.2.139 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.74 62.0 6.29e-01 94.1% 96.0%
5034407 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.74 63.0 5.72e-01 96.1% 78.6%
4034200 101.1.1.275 ↗ alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.73 60.0 5.59e-01 96.1% 72.3%
4139052 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 5.29e-01 96.1% 62.7%
3279339 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.73 62.0 4.26e-01 98.0% 28.6%
4280807 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.73 59.0 5.77e-01 90.2% 85.5%
3452941 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.67e-01 88.2% 98.0%
4961282 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.72 61.0 5.70e-01 96.1% 86.2%
3955987 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 61.0 4.99e-01 96.1% 53.7%
3959252 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 61.0 5.80e-01 96.1% 85.0%
2464007 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 61.0 5.64e-01 98.0% 74.2%
3283374 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 61.0 5.05e-01 98.0% 55.8%
3959876 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 59.0 4.90e-01 98.0% 51.0%
5022068 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.72 61.0 4.49e-01 98.0% 50.7%
5060990 2005.1.1.18 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.72 62.0 3.86e-01 96.1% 17.9%
4165188 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.72 59.0 5.03e-01 92.2% 56.5%
3959868 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 5.27e-01 96.1% 64.0%
4947296 101.1.2.905 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4443 0.72 60.0 5.37e-01 98.0% 85.3%
4334910 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.72 57.0 4.33e-01 90.2% 38.4%
4243530 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 58.0 5.40e-01 94.1% 72.3%
3967748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 59.0 5.02e-01 96.1% 56.5%
5064701 101.1.2.879 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF134 0.71 60.0 5.21e-01 96.1% 61.3%
4947436 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.83e-01 96.1% 87.3%
4530655 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 58.0 4.85e-01 98.0% 51.0%
3767621 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.71 54.0 4.70e-01 84.3% 56.2%
4534822 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.71 59.0 5.30e-01 96.1% 65.3%
4289285 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 60.0 5.05e-01 98.0% 56.7%
5056682 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 5.30e-01 94.1% 72.9%
3284011 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 56.0 5.14e-01 90.2% 67.1%
4205790 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 59.0 5.09e-01 96.1% 60.0%
3959929 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.71 60.0 5.23e-01 98.0% 63.7%
4244028 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.70 57.0 5.46e-01 92.2% 80.0%
4175748 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 59.0 5.12e-01 96.1% 63.7%
4934485 101.1.1.107 ↗ alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.70 60.0 5.35e-01 98.0% 68.9%
None — 0.70 56.0 3.59e-01 90.2% 18.1%
4980021 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.70 60.0 5.44e-01 98.0% 72.9%
3793393 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 56.0 4.87e-01 90.2% 68.8%
3972638 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 58.0 5.45e-01 96.1% 73.8%
4944862 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.70 59.0 5.13e-01 96.1% 62.5%
4303963 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 58.0 5.22e-01 96.1% 66.7%
3286778 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 60.0 5.46e-01 100.0% 72.9%
4944887 101.1.1.546 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.70 57.0 4.40e-01 92.2% 43.3%
3913655 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 59.0 5.19e-01 100.0% 66.3%
3793383 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.70 55.0 5.19e-01 98.0% 72.3%
3971712 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.70 60.0 4.53e-01 100.0% 64.6%
4997411 101.1.3.33 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.70 58.0 5.08e-01 96.1% 61.3%
3282225 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.70 59.0 5.12e-01 96.1% 62.5%
5030780 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.69 54.0 5.49e-01 98.0% 92.0%
3985633 101.1.1.13 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.69 60.0 5.87e-01 100.0% 96.4%
None — 0.69 59.0 4.94e-01 98.0% 56.7%
4391758 101.1.6.1 ↗ alpha arrays › HTH › HTH › TrpR › Trp_repressor 0.69 59.0 4.89e-01 100.0% 55.8%
3284469 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.69 57.0 5.06e-01 96.1% 64.0%
5073990 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.69 56.0 5.07e-01 96.1% 76.0%
3090474 4020.1.1.0 ↗ a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.69 54.0 4.04e-01 90.2% 37.7%
3284051 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 55.0 5.13e-01 96.1% 72.3%
3279596 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.68 58.0 3.98e-01 100.0% 27.4%
4396640 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.68 58.0 4.49e-01 100.0% 45.8%
3620215 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.67 54.0 3.80e-01 96.1% 31.1%
4470607 101.1.1.26 ↗ alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.66 56.0 4.37e-01 98.0% 48.7%
3707219 4964.1.1.0 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.66 56.0 4.28e-01 96.1% 40.8%
3256356 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 49.0 4.63e-01 90.2% 67.2%
3753093 101.1.1.24 ↗ alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.66 55.0 5.12e-01 96.1% 78.5%
3998880 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 55.0 4.57e-01 98.0% 66.3%
4683276 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.64 53.0 4.47e-01 100.0% 53.7%
3239905 101.1.1.35 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.64 50.0 4.37e-01 98.0% 56.5%
3693312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 51.0 4.95e-01 96.1% 90.0%
3587350 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.63 48.0 4.85e-01 88.2% 92.0%
5070906 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.62 48.0 4.57e-01 84.3% 73.3%