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NC_074758.1__YP_010774571.1__QJV46_gp65__00065

Bact-Vir

NC_074758.1__YP_010774571.1__QJV46_gp65__00065

Identity

Accession:
NC_074758 ↗
Kingdom:
phage

Quality

81.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Serbinvirus› Serratia_phage_vB_SmaS_Opt-155

TaxID: 2902690

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-90
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wjnM01 1.20.85.10 Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like 0.60 46.0 3.76e-01 81.0% 59.4%
2qyoA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 47.0 3.35e-01 98.7% 47.8%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 35.0 3.56e-01 79.7% 68.3%
3bg2A02 1.10.3550.10 Mainly Alpha › Orthogonal Bundle › eoxyguanosinetriphosphate triphosphohydrolase fold › eoxyguanosinetriphosphate triphosphohydrolase domain-like 0.52 44.0 3.81e-01 88.6% 82.1%
3h1qA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 38.0 3.48e-01 86.1% 74.8%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003296 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.66 56.0 5.11e-01 98.7% 85.5%
4136082 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.62 47.0 2.91e-01 82.3% 71.8%
3743762 6155.1.1.0 ↗ alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.57 44.0 3.43e-01 82.3% 73.5%
3640451 109.16.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › TROVE domain-like › TROVE domain-like › DUF2828 0.54 47.0 3.05e-01 96.2% 45.5%
3644829 109.4.1.1991 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_CAF1_bind, HEAT_ULK4 0.54 46.0 3.42e-01 98.7% 76.5%
3809654 149.1.1.1 ↗ alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.51 44.0 2.71e-01 100.0% 74.2%