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YP_010805620.1
Arc-VirNC_077159__YP_010805620.1__QKV40-gp02__00002
Identity
- Accession:
- NC_077159 ↗
- Protein ID:
- YP_010805620.1 ↗
- Kingdom:
- archaea
Quality
91.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
rep: MZ666939__QYW08133.1__15570-00036__00036__D2-58
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k4kA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 56.0 | 4.40e-01 | 100.0% | 94.6% |
| 6klwF03 | 3.10.20.110 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.62 | 48.0 | 3.95e-01 | 86.2% | 94.5% |
| 1ef1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.61 | 46.0 | 4.24e-01 | 84.5% | 97.5% |
| 4dolA01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.61 | 41.0 | 3.08e-01 | 70.7% | 37.2% |
| 6kykA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.60 | 47.0 | 4.25e-01 | 87.9% | 98.8% |
| 2incC00 | 3.10.20.270 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › TmoB-like | 0.58 | 45.0 | 4.07e-01 | 87.9% | 97.6% |
| 4tq1A02 | 3.10.20.620 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 45.0 | 3.94e-01 | 87.9% | 87.9% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 43.0 | 4.02e-01 | 86.2% | 98.7% |
| 2kanA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 42.0 | 4.03e-01 | 86.2% | 98.6% |
| 4hwiB01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 41.0 | 3.90e-01 | 84.5% | 97.2% |
| 2kd0A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 38.0 | 3.68e-01 | 84.5% | 97.2% |
| 6larC01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 38.0 | 3.70e-01 | 86.2% | 100.0% |
| 3demA02 | 2.10.25.10 | Mainly Beta › Ribbon › Laminin › Laminin | 0.51 | 27.0 | 3.12e-01 | 87.9% | 71.8% |
| 6x6uA01 | 3.60.9.10 | Alpha Beta › 4-Layer Sandwich › Aldehyde Ferredoxin Oxidoreductase; A, domain 1 › Aldehyde ferredoxin oxidoreductase, N-terminal domain | 0.51 | 40.0 | 2.94e-01 | 100.0% | 100.0% |
| 6focH01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.50 | 37.0 | 3.20e-01 | 84.5% | 75.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3485674 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.62 | 48.0 | 3.01e-01 | 87.9% | 23.8% |
| 3776212 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 49.0 | 4.49e-01 | 87.9% | 96.0% |
| 4978785 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 47.0 | 4.10e-01 | 87.9% | 97.9% |
| 3932747 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.60 | 47.0 | 4.20e-01 | 87.9% | 100.0% |
| 3606623 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 47.0 | 4.42e-01 | 86.2% | 95.7% |
| 5029419 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.57 | 51.0 | 3.40e-01 | 100.0% | 34.2% |
| 4611822 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 45.0 | 4.38e-01 | 87.9% | 92.3% |
| 5070651 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 45.0 | 4.36e-01 | 87.9% | 96.9% |
| 5056298 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.56 | 49.0 | 3.33e-01 | 100.0% | 31.8% |
| 5051427 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.56 | 49.0 | 3.29e-01 | 100.0% | 37.4% |
| 3669556 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.55 | 47.0 | 4.21e-01 | 100.0% | 75.3% |
| 4949202 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.55 | 48.0 | 3.19e-01 | 100.0% | 40.8% |
| 4931066 | 4070.1.1.2 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 | 0.54 | 47.0 | 3.16e-01 | 100.0% | 36.6% |
| 3709652 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 42.0 | 4.03e-01 | 87.9% | 95.7% |
| 3706798 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 43.0 | 2.82e-01 | 98.3% | 19.1% |
| 3866142 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.53 | 45.0 | 3.02e-01 | 100.0% | 24.3% |
| 3671965 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 43.0 | 3.01e-01 | 100.0% | 38.6% |
| 3172042 | 376.1.1.19 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › RINGv | 0.50 | 28.0 | 2.71e-01 | 82.8% | 42.9% |