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NC_079141.1__YP_010842520.1__QLQ74_gp50__00050
Bact-VirNC_079141.1__YP_010842520.1__QLQ74_gp50__00050
Identity
- Accession:
- NC_079141 ↗
- Kingdom:
- phage
Quality
81.5
mean pLDDT
Taxonomy
TaxID: 2652405
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 32-112
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qdmA03 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.71 | 49.0 | 5.06e-01 | 71.6% | 90.9% |
| 3zgkA00 | 1.10.10.2460 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 43.0 | 4.51e-01 | 76.5% | 88.9% |
| 3ezxA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.57 | 41.0 | 4.07e-01 | 76.5% | 94.2% |
| 1tedA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.57 | 48.0 | 4.08e-01 | 98.8% | 75.2% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.54 | 43.0 | 4.13e-01 | 90.1% | 93.8% |
| 1u3dA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 40.0 | 3.55e-01 | 87.7% | 67.9% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 44.0 | 3.68e-01 | 95.1% | 85.5% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928087 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.79 | 58.0 | 6.19e-01 | 75.3% | 90.0% |
| 5018167 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.79 | 50.0 | 5.40e-01 | 70.4% | 74.3% |
| 3214724 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.79 | 55.0 | 6.03e-01 | 71.6% | 100.0% |
| 3234099 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.78 | 53.0 | 5.87e-01 | 70.4% | 95.4% |
| 4968313 | 101.1.6.12 ↗ | alpha arrays › HTH › HTH › TrpR › HTH_23 | 0.76 | 51.0 | 5.18e-01 | 71.6% | 70.0% |
| 3218552 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.73 | 49.0 | 5.03e-01 | 70.4% | 94.9% |
| 5072206 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.68 | 56.0 | 4.92e-01 | 88.9% | 66.7% |
| 2628410 | 101.1.1.86 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Raf1_HTH | 0.67 | 48.0 | 5.19e-01 | 85.2% | 92.4% |
| 4970738 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.67 | 52.0 | 4.65e-01 | 86.4% | 61.7% |
| 5077614 | 182.1.3.3 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX › DNA_primase_lrg | 0.66 | 49.0 | 5.06e-01 | 79.0% | 90.7% |
| 5004314 | 101.1.1.60 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 | 0.62 | 47.0 | 4.91e-01 | 98.8% | 86.7% |
| 4971986 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.61 | 47.0 | 4.37e-01 | 87.7% | 97.3% |
| 4964824 | 101.1.6.44 ↗ | alpha arrays › HTH › HTH › TrpR › HVO_2833_C | 0.54 | 44.0 | 4.12e-01 | 93.8% | 95.2% |
| 3465073 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.53 | 41.0 | 3.98e-01 | 87.7% | 76.7% |