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NC_079144.1__YP_010842706.1__QLQ77_gp44__00044
Bact-VirNC_079144.1__YP_010842706.1__QLQ77_gp44__00044
Identity
- Accession:
- NC_079144 ↗
- Kingdom:
- phage
Quality
78.0
mean pLDDT
Taxonomy
TaxID: 2571250
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-58
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fnnB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 57.0 | 4.62e-01 | 80.0% | 50.5% |
| 2vy1A00 | 1.10.4180.10 | Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY | 0.73 | 59.0 | 4.19e-01 | 96.4% | 30.1% |
| 3gwlA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.65 | 51.0 | 4.16e-01 | 87.3% | 77.4% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.64 | 55.0 | 3.48e-01 | 100.0% | 17.7% |
| 1ybzA00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.63 | 44.0 | 4.02e-01 | 74.5% | 53.9% |
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 48.0 | 4.89e-01 | 94.5% | 96.2% |
| 4gxbA02 | 1.20.80.60 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.59 | 41.0 | 3.95e-01 | 72.7% | 87.1% |
| 4dqnA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.54 | 46.0 | 3.38e-01 | 98.2% | 58.2% |
| 1i5nB00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.53 | 47.0 | 3.59e-01 | 98.2% | 83.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3984017 | 101.1.2.293 ↗ | alpha arrays › HTH › HTH › winged helix domain › IncFII_repA | 0.85 | 64.0 | 4.28e-01 | 80.0% | 23.6% |
| 4069049 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.75 | 56.0 | 3.74e-01 | 89.1% | 21.0% |
| 4281883 | 230.3.1.1 ↗ | a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS | 0.66 | 55.0 | 4.07e-01 | 94.5% | 37.0% |
| 5039201 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.65 | 54.0 | 3.67e-01 | 94.5% | 61.9% |
| 3378446 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 56.0 | 3.49e-01 | 100.0% | 19.0% |
| 3510767 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.61 | 50.0 | 2.79e-01 | 87.3% | 7.8% |
| 5026124 | 164.1.1.1 ↗ | alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › CM_2 | 0.61 | 45.0 | 4.31e-01 | 81.8% | 67.7% |
| 4682789 | 2498.4.1.1 ↗ | mixed a+b and a/b › Zincin-like › HSP90 C-terminal domain (C-terminal part of Pfam 00183) › HSP90 C-terminal domain (C-terminal part of Pfam 00183) › HSP90 | 0.60 | 46.0 | 3.43e-01 | 85.5% | 55.9% |