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NC_079174.1__YP_010844349.1__QNG95_gp58__00058

Bact-Vir

NC_079174.1__YP_010844349.1__QNG95_gp58__00058

Identity

Accession:
NC_079174 ↗
Kingdom:
phage

Quality

76.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-121
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13262.12 best DUF4054 31.8 1.90e-07 94.9% 97.1%
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1xb2B01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 27.0 3.56e-01 87.3% 75.0%
2b8iA00 1.20.1280.100 Mainly Alpha › Up-down Bundle › Monooxygenase › Pas factor, saposin domain 0.62 34.0 3.99e-01 89.8% 79.2%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 36.0 3.96e-01 96.6% 83.0%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.54 33.0 3.38e-01 85.6% 61.9%
7eu3E01 1.10.287.3510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.52 33.0 3.65e-01 89.0% 83.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3605252 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.52 29.0 2.60e-01 72.0% 38.8%