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NC_079186.1__YP_010845173.1__QNH07_gp29__00029

Bact-Vir

NC_079186.1__YP_010845173.1__QNH07_gp29__00029

Identity

Accession:
NC_079186 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chaseviridae› Longwangvirus› Aeromonas_phage_BUCT696

TaxID: 2911664

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 27-166
PDB
Domain cluster: rep: NC_047778.1__YP_009787320.1__QLL94_gp20__00020__D40-226
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4pqxA01 2.40.50.500 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain 0.66 34.0 4.64e-01 85.7% 97.3%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 41.0 4.74e-01 90.7% 97.0%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 38.0 4.27e-01 95.0% 82.9%
7tuvA02 2.40.50.700 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 35.0 4.20e-01 91.4% 95.4%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 39.0 4.45e-01 86.4% 96.2%
6lbtA01 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 39.0 3.88e-01 90.0% 71.1%
1vwxd00 3.10.440.10 Alpha Beta › Roll › Ribosomal Protein L31e; Chain: W; › Ribosomal protein L31 0.52 35.0 3.86e-01 92.1% 89.7%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3189631 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.67 44.0 4.58e-01 93.6% 71.5%
4032024 2.1.1.335 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29902 0.65 40.0 4.80e-01 87.1% 91.6%
3506791 2.1.1.69 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI2 0.64 40.0 4.02e-01 92.9% 60.7%
5004339 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 41.0 3.92e-01 92.1% 54.2%
4152821 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.60 40.0 4.37e-01 97.9% 82.6%
3446497 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 44.0 4.41e-01 91.4% 75.2%
3940786 2.3.1.1 ↗ beta barrels › OB-fold › TIMP-like › TIMP-like › TIMP 0.59 43.0 4.46e-01 91.4% 80.8%
4478491 2.1.1.6 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB 0.57 40.0 4.47e-01 92.9% 97.1%
4045758 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 48.0 4.35e-01 91.4% 74.7%
4402145 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.55 42.0 3.95e-01 81.4% 77.1%
3564235 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.53 41.0 4.35e-01 81.4% 96.8%
3598330 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 43.0 4.15e-01 85.7% 85.0%
3905133 2.1.1.243 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30831 0.52 44.0 4.55e-01 90.7% 99.2%
5064585 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.51 27.0 3.28e-01 81.4% 78.9%
2659065 265.1.1.3 ↗ a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › AP205_coat 0.50 28.0 3.19e-01 82.1% 73.3%