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NIb

Euk-Vir

Verbena_virus_Y

NIb__YP_001936186__Verbena_virus_Y__515446

Identity

Accession:
YP_001936186 ↗
Protein ID:
NIb
Kingdom:
euk

Quality

91.2 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Verbena_virus_Y

TaxID: 515446

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 409-474
PDB
Domain cluster: rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 26.2 4.60e-06 77.3% 11.1%
D2 medium residues 13-38_64-83_104-206
PDB
Domain cluster: rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 63.1 2.90e-17 71.1% 23.3%
D3 medium residues 84-103_207-218_252-315
PDB
Domain cluster: rep: NIb__YP_010088127__Dendrobium_chlorotic_mosaic_virus__2562807__D81-113_256-322
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 57.4 1.60e-15 99.0% 20.0%
D4 medium residues 219-251_316-408
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 53.9 1.80e-14 73.8% 20.9%