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NIb

Euk-Vir

Apium_virus_Y

NIb__YP_004123962__Apium_virus_Y__168135

Identity

Accession:
YP_004123962 ↗
Protein ID:
NIb
Kingdom:
euk

Quality

92.3 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Potyvirus_apii

TaxID: 168135

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 30-82_399-487
PDB
Domain cluster: rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 33.0 3.90e-08 42.2% 12.2%
D2 medium residues 83-110_225-250_311-398
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 59.2 4.60e-16 71.8% 21.3%
D3 medium residues 111-196
PDB
Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 56.7 2.50e-15 100.0% 20.4%
D4 medium residues 197-224_251-310
PDB
Domain cluster: rep: NIb__YP_010088127__Dendrobium_chlorotic_mosaic_virus__2562807__D81-113_256-322
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 39.3 5.00e-10 68.2% 13.1%