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NIb
Euk-VirHippeastrum_mosaic_virus
NIb__YP_006390065__Hippeastrum_mosaic_virus__421010
Identity
- Accession:
- YP_006390065 ↗
- Protein ID:
- NIb
- Kingdom:
- euk
Quality
90.7
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Hippeastrum_mosaic_virus
TaxID: 421010
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 403-477
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
D2
medium
residues 1-28_63-82_112-224_275-312
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 77.8 | 1.00e-21 | 71.4% | 26.9% |
D3
medium
residues 83-111_225-274_313-401
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 38.9 | 6.70e-10 | 53.6% | 20.9% |
| PF00680.26 | RdRP_1 | 28.7 | 7.90e-07 | 38.1% | 11.6% |