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NIb
Euk-VirSweet_potato_virus_G
NIb__YP_006493342__Sweet_potato_virus_G__46619
Identity
- Accession:
- YP_006493342 ↗
- Protein ID:
- NIb
- Kingdom:
- euk
Quality
92.0
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Sweet_potato_virus_G
TaxID: 46619
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 406-490
Domain cluster:
rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
D2
medium
residues 12-47_62-86_109-218_252-313
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 71.4 | 8.80e-20 | 58.8% | 25.6% |
| PF00680.26 | RdRP_1 | 44.7 | 1.20e-11 | 30.5% | 14.0% |
D3
medium
residues 87-108_219-251_314-405
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 41.5 | 1.00e-10 | 64.6% | 21.6% |