NIb

Euk-Vir

Tamarillo_leaf_malformation_virus

NIb__YP_009126869__Tamarillo_leaf_malformation_virus__945960

Identity

91.8 mean pLDDT

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Tamarillo_leaf_malformation_virus

TaxID: 945960

View cluster (450 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-57_398-472

PDB

Domain cluster: rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	26.3	4.40e-06	73.7%	12.4%

D2 medium residues 1-28_65-82_256-313

PDB

Domain cluster: rep: NIb__YP_009252418__Tobacco_mosqueado_virus__1792583__D13-29_64-80_248-311

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	32.2	7.20e-08	57.7%	12.7%

D3 medium residues 83-107_220-255_314-393

PDB

Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	40.3	2.40e-10	58.2%	20.4%
PF00680.26	RdRP_1	29.0	6.60e-07	42.5%	9.8%

D4 medium residues 108-219

PDB

Domain cluster: rep: NIa__YP_003620390__Freesia_mosaic_virus__421012__D109-224

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00680.26 best	RdRP_1	66.3	3.20e-18	99.1%	24.9%