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NIb

Euk-Vir

Daphne_virus_Y

NIb__YP_009509106__Daphne_virus_Y__282712

Identity

Accession:
YP_009509106 ↗
Protein ID:
NIb
Kingdom:
euk

Quality

90.6 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Daphne_virus_Y

TaxID: 282712

Cluster

View cluster (450 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 412-479
PDB
Domain cluster: rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 25.2 9.50e-06 75.0% 11.1%
D2 medium residues 18-34_65-87_110-218
PDB
Domain cluster: rep: NIb__YP_003725727__Panax_virus_Y__796352__D1-80_166-195
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 67.2 1.70e-18 81.9% 26.0%
D3 medium residues 88-109_255-312
PDB
Domain cluster: rep: NIb__YP_010088127__Dendrobium_chlorotic_mosaic_virus__2562807__D81-113_256-322
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 35.4 7.50e-09 77.5% 12.7%
D4 medium residues 219-254_313-411
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 49.5 4.00e-13 72.6% 21.8%