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NIb

Euk-Vir

Zucchini_shoestring_virus

NIb__YP_009667098__Zucchini_shoestring_virus__1679239

Identity

Accession:
YP_009667098 ↗
Protein ID:
NIb
Kingdom:
euk

Quality

92.1 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Potyvirus› Zucchini_shoestring_virus

TaxID: 1679239

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 417-501
PDB
Domain cluster: rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
D2 medium residues 13-47_66-104_178-195_291-311
PDB
Domain cluster: rep: NIb__YP_003725727__Panax_virus_Y__796352__D1-80_166-195
D3 medium residues 105-177_196-228_253-290
PDB
Domain cluster: rep: replicase__YP_009179352__Aphis_glycines_virus_2_Viruses.__X__D99-112_203-276_293-321_386-433
D4 medium residues 229-252_312-416
PDB
Domain cluster: rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 59.6 3.40e-16 93.8% 25.1%