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NIb

Euk-Vir

Passiflora_edulis_symptomless_virus

NIb__YP_010088106__Passiflora_edulis_symptomless_virus__2294149

Identity

Accession:
YP_010088106 ↗
Protein ID:
NIb
Kingdom:
euk

Quality

89.6 mean pLDDT

Taxonomy

Orthornavirae› Pisuviricota› Stelpaviricetes› Patatavirales› Potyviridae› Roymovirus› Passiflora_edulis_symptomless_virus

TaxID: 2294149

Cluster

View cluster (450 members)

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 401-493
PDB
Domain cluster: rep: NIb__YP_007032445__Cassava_brown_streak_virus__137758__D405-481
D2 medium residues 14-216_256-309
PDB
Domain cluster: rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 67.5 1.30e-18 73.2% 40.4%
PF00680.26 RdRP_1 24.1 1.90e-05 21.8% 11.8%
D3 medium residues 217-255_310-400
PDB
Domain cluster: rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00680.26 best RdRP_1 38.1 1.10e-09 70.8% 21.8%
PF00680.26 RdRP_1 28.5 9.50e-07 30.8% 8.9%