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NIb_polymerase
Euk-VirThunberg_fritillary_mosaic_virus
NIb_polymerase__YP_254722__Thunberg_fritillary_mosaic_virus__299200
Identity
- Accession:
- YP_254722 ↗
- Protein ID:
- NIb_polymerase
- Kingdom:
- euk
Quality
91.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Thunberg_fritillary_mosaic_virus
TaxID: 299200
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 402-476
Domain cluster:
rep: NIb_protein__YP_006280739__Tomato_necrotic_stunt_virus__1176153__D28-67_411-488
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 28.3 | 1.10e-06 | 77.3% | 12.0% |
D2
medium
residues 64-88_103-216_252-311
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 64.1 | 1.50e-17 | 70.3% | 29.6% |
| PF00680.26 | RdRP_1 | 40.5 | 2.10e-10 | 31.2% | 13.1% |
D3
medium
residues 89-102_217-251_312-396
Domain cluster:
rep: KR816341.1__AKQ06880.1__X__00021__D162-195_238-325
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 61.9 | 6.60e-17 | 64.9% | 21.1% |