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NIb_protein
Euk-VirSorghum_mosaic_virus
NIb_protein__NP_734091__Sorghum_mosaic_virus__32619
Identity
- Accession:
- NP_734091 ↗
- Protein ID:
- NIb_protein
- Kingdom:
- euk
Quality
90.5
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Stelpaviricetes›
Patatavirales›
Potyviridae›
Potyvirus›
Sorghum_mosaic_virus
TaxID: 32619
Cluster
View cluster (450 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-87_110-218_258-314
Domain cluster:
rep: NIb__YP_009221991__Jasmine_virus_T__1775963__D1-51_64-80_112-210_276-312
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 73.4 | 2.20e-20 | 45.9% | 25.6% |
| PF00680.26 | RdRP_1 | 34.7 | 1.20e-08 | 22.9% | 12.2% |
D2
medium
residues 88-109_219-257_315-425
Domain cluster:
rep: hypothetical_protein_2__YP_009337040__Changjiang_tombus-like_virus_21__1922815__D1-47_99-181
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00680.26 best | RdRP_1 | 72.7 | 3.50e-20 | 65.7% | 26.7% |
| PF00680.26 | RdRP_1 | 33.5 | 2.80e-08 | 27.3% | 9.3% |